KEGG   Bifidobacterium bifidum BGN4: BBB_0467
Entry
BBB_0467          CDS       T02135                                 
Name
(GenBank) RNA pseudouridylate synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
bbf  Bifidobacterium bifidum BGN4
Brite
KEGG Orthology (KO) [BR:bbf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bbf03009]
    BBB_0467
Enzymes [BR:bbf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BBB_0467
Ribosome biogenesis [BR:bbf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BBB_0467
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFL04062
UniProt: I3WGP9
Position
588886..589827
AA seq 313 aa
MSRLVPAPDALVGSRFDVAVSKMLGISRAKAADLIESGQARVLDRAIAKSGTLLYGETVE
FDIAEERHEPEPVCLDMSIVYEDDDVVVVDKPVGVAAHASAGWTGPTVLGSLLKRGVRIT
SYGAPGRQGIVSRLDVGTSGLMLVCKSELAYKEMRRQFSEHEVVKTYHAMVQGNLKEDKA
TIEAPIGRAKVSDFRFCVTPSGKPAVTHWDVLDRFGEATLVSVNLETGRTHQIRVHFSSI
GHPLVGDPMYGANPVLAGELGLDRQWLHAMKLEFRHPRTHLWTSVESHYPADLAHALELM
RARHASTGLEAAD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagccgtctcgttccggcgcccgacgcattggtgggatcacgattcgacgtggcggtt
tccaagatgctgggcatctcgcgtgccaaggcggcggatcttatcgaatccggccaagcc
cgcgtgctggatcgtgcgatcgccaagtcgggcacgctgctgtatggggagaccgtcgaa
ttcgacatcgccgaagaacggcatgagccggaaccggtgtgtctcgacatgtccatcgtg
tatgaggatgacgatgtcgtcgtggtcgacaagcccgtgggcgtcgctgcacatgcttcg
gccggatggacaggccccaccgtattgggcagcctgctcaaacgcggcgtgcgcatcacc
tcatacggagctcccgggcggcagggcatcgtgtcgcggttggatgtgggcacgtccggc
ctgatgctggtgtgcaagtcagagctggcgtacaaggagatgcggcggcagttctccgag
catgaggtggtcaagacctatcatgcgatggtccagggcaacctcaaggaggacaaggcc
accatcgaagcgcccatcggccgcgccaaggtgtcggacttccgcttctgcgtcacgccg
tcgggcaagccggcggtcacgcattgggacgtgctggaccgattcggcgaggcgacgctg
gtttcggtgaatctcgaaaccggacgcacgcatcagattcgcgtgcatttctcttcgatc
gggcatcctctggtcggagacccgatgtatggggccaatccggtgctggccggggagctc
ggcctggaccggcagtggttgcatgcgatgaagctggagtttcgccacccccgcacccat
ctctggacgtcggtcgaatcccactacccggccgatcttgcccatgcactggaacttatg
cgcgccaggcatgcctcaactggtctggaagccgccgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system