KEGG   Bordetella bronchiseptica 253: BN112_0124
Entry
BN112_0124        CDS       T02344                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbh  Bordetella bronchiseptica 253
Pathway
bbh03410  Base excision repair
bbh03430  Mismatch repair
bbh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN112_0124 (recJ)
   03430 Mismatch repair
    BN112_0124 (recJ)
   03440 Homologous recombination
    BN112_0124 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbh03400]
    BN112_0124 (recJ)
DNA repair and recombination proteins [BR:bbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BN112_0124 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BN112_0124 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN112_0124 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4 Beta-lactamase2
Other DBs
NCBI-ProteinID: CCJ52042
UniProt: A0A0C6P0F6
Position
complement(105594..107162)
AA seq 522 aa
MAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADV
DFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITD
HHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRL
DALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFD
LGFALGPRINAAGRLADMSLGIACLTTDDEAQALEMARELDNINRERRTIEAEMRDQALA
AMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPD
VHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPL
LETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQ
RFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcgtggcccgcgctgctgccgcccgaccgcctgacccactcggcccacgcggccgcc
gtgctcgccgacgccatcgagcagggcaagcgcctgctcatcgtggccgactacgactgc
gatggcgccacggcctgcgcggtcggcctgcgcgccctgtcggccatgggcgccgacgtg
gatttcctggttcccaaccgcttcgagaccggctatggcctctcgccggcggtcgtcgag
ctggcctgccgccatcggcgcggcaagcccgacatcatcatcacggtcgacaacggcatc
gccagcgtcgacggcgtggccgccgccaacgccgccggcatcggcgtggtcatcaccgac
caccacttgcccggcgacacgctgcccgaggccctggccatcgtcaatcccaaccagccc
ggctgcggtttcggctccaagcacctggccggcgtcggcgtcattttctacatgatgctg
gcgctgcgcgccgagctgcgccgccgcggcgtctacgcgccggatggcggcccgcgcctg
gatgcgctgtccgacctggtggccctgggcacggtggccgacgtggtcaagctggacgcc
aacaaccggctgctggtcacgcaggggctgcagcgcatgcgggccggccgcatgcagccc
ggcgtgcgcgccctgttcgccgtggccgggcgcgagccgcgcaccgccagcggcttcgac
ctgggctttgccctcggtccgcgcatcaacgccgccggccggctggccgacatgagcctg
ggcatcgcctgcctgaccaccgacgacgaggcgcaggcgctcgaaatggcgcgcgagctc
gacaacatcaaccgcgaacgccgcaccatcgaagccgagatgcgcgaccaggcgctggcc
gccatggaggcgcccgacgccgccgccggcgccacggtatgcgtattcgaccccggctgg
caccagggcgtggtcggcctggtggcctcgcgcctgaaagagaagttctggcgccccacg
ctggccttcgccccggccggcgaggacgagctgcgcggctcgggccgctcgatccccgac
gtgcatttgcgcgacgcgctcgacctggtgtccaagcgccacccgggcctgatacgcaag
ttcggcggccacgccatggccgccggcctgaccctgggcagcggcgatttcgccgccttc
gccccggccttcgacgccgcggtgcgcgaactcaccgggcgcgaccgcttcgagccgctg
ctcgaaaccgacggctcgctcgaaagcggctacgccaatgccgaggtggccggcctgctg
cagcagcaggtctggggcgcggggttcgccgccccgctgttcctggacgaattcaccgtg
cgcagccagcgcctggtgggcggcaagcacctgaagctggcgctcgagcgcggccaccag
cgcttcgacgccatctggttcggccacgaccagtccctgcccgagcgcatccaggccgcc
taccggctggagcagaacatctggaatggcatggtgtcggtacagctggtcatcgagcac
gccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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