KEGG   Borreliella burgdorferi N40: BbuN40_0230
Entry
BbuN40_0230       CDS       T02075                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bbn  Borreliella burgdorferi N40
Pathway
bbn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BbuN40_0230 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbn03021]
    BbuN40_0230 (rho)
   03019 Messenger RNA biogenesis [BR:bbn03019]
    BbuN40_0230 (rho)
Transcription machinery [BR:bbn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BbuN40_0230 (rho)
Messenger RNA biogenesis [BR:bbn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BbuN40_0230 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab ATPase_2 NACHT AAA Spore_III_AA DUF5091 AAA_22 DUF1269 OB_RNB AAA_25
Other DBs
NCBI-ProteinID: ADQ29210
Position
complement(234429..235976)
AA seq 515 aa
MDKKNGGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASSVTKSADLSGVKDSNG
VIFPDFDYDIPSSGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNIDVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPN
VKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggataaaaaaaatggtggatttgatttagaaagtgaaataaggcggttggatgtttct
aaagagtttaagattgaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctgcatctagcgtgacaaaatctgcagatttaagtggcgtaaaggattcaaacggg
gtaatatttcctgattttgattatgatattccttcttcaggtttagaaaataatattaaa
actttagagcaaagtaatatcatcaaattttttaatggtaaagattatgtagagattgaa
aaactttatgataagccaattacagaggttagaaaaattgttgaaggtcttgggaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtgaaaatatta
agtgagaataatattgatgttttatttacaggtgtgcttgatgtgcttagtgatggttat
gggtttttgagaactgcatcaaattcttatctttctggaggcaatgatgtttacgtttct
ccctctcagattagactttttaatttaaggacaggtgatattttatatggccaaattaga
tcgcctagagatggtgagagattttttgcaatggttaaaattaaatctattaatgatcaa
gatcctacgtttgctcaaaacagaataccttttgataatttaactcctctttatcccaat
gtgaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcacctataggtaaggggcaaagggctttaatagtttctcctccaaaagcgggaaagact
accctgcttcaaaaaatagctaatgcaataactactaattattcagatgttattttaatg
atactacttattgatgagagaccagaagaagttacagatatgattcgtagcgttaaaggc
gaagtaattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagagatg
gttattgaaaaggctaaaaggcttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggtggggtagattctaatgctcttcataaaccaaagaggttttttgggtctgctaga
aatatagaagaagggggaagtttaactattatagctactgctttggttgatactggtagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagactttttcctgctattaatattaaaaagtcaggtacc
agaaaagaagaattgcttcttagtgaagaggagcgttctaagattttgcttattagaaga
atacttggaggtgttgatgattatgagggagttgaagttctgatagaaaagatgaaaaaa
agcaaaaacaatgaaattttcttgaagacaatgagcaatggtaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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