KEGG   Bifidobacterium bifidum PRL2010: BBPR_1042
Entry
BBPR_1042         CDS       T01340                                 
Symbol
uvrC
Name
(GenBank) UvrC Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bbp  Bifidobacterium bifidum PRL2010
Pathway
bbp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBPR_1042 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbp03400]
    BBPR_1042 (uvrC)
DNA repair and recombination proteins [BR:bbp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBPR_1042 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_2 HHH_5 UVR GIY-YIG HHH UPF0758_N DUF1995 DUF4124 HHH_3
Other DBs
NCBI-ProteinID: ADP36109
UniProt: A0A0H3ECX1
Position
complement(1223861..1226203)
AA seq 780 aa
MTNDIERHSPEVWRKAADSLRGEADASDAVAKVNRNGAPLLGDTRDLFRPKTGDIPAQPG
VYKWRDGEGRVIYVGKAKSLRNRLANYFQPLYLLHPRTQTMVLTARSLEWTVVGTELEAL
TLEYTWIKEFDPRFNVQFRDDKTYPYLAISSGEAVPRVWVTRSRKRRDARYFGPYAKVWE
LRQSLDKLLRTFPVRTCTTNVFHKAELTGRPCLLASIGKCSAPCIGRIAPKEHRRMCEQL
VGVMTGRLGKSYIAQLTRDMKDASAELEFEKAARLRDEIQMLQTVMQQNAVVFDQDVDAD
VFGMASDELEASVHAFIVRDGSIRGERNWSVERVEDVSDGELIDDLIMQVYSDVAADNGL
NVDPHDGTAPSMASSSGNEGVPTAEGGASIVERRDAIGSTQTVTAKSSVERAQATRTRRE
RQEQTGRADLLAPIAPVPREVIVPVEPARRAELESWLSGLRGAVVTIRVASRGEKKALMN
RANENAGQALQRSKMSRISDMGTRTAAMNDVAKALGLAQAPLRIECYDISNTVGGAFQVA
SMVVFEDAIAKKSEYRRFAIRGDDGKGALDDLSALYETLTRRFRHGNIAGDSGDSMDNER
RAESSDTSASTTTASSPDGIRDAGVVQQNTNRHHFAYIPNLVVVDGGHPQVMAAAKALAD
CGVNDVAVCGLAKRLEEVWVPDDEYPIILKRQSEGMYLLQRVRDESHRFAITYHRQTRRK
GALRSALDGIPGVGETYQKRLLSHFGSVRAMRDASVEELEAVKGIGHAKAEAIHTALHTE
NT seq 2343 nt   +upstreamnt  +downstreamnt
gtgacgaacgatatcgagcggcattcacccgaagtgtggagaaaagcggccgattcgctg
cgcggggaggcggacgcttcggatgcggtcgccaaagtgaacaggaacggggctccgctg
ctgggggacacgcgcgacctgttccggccgaagaccggagatatccccgcccagcccgga
gtctacaaatggcgggacggcgaaggacgcgtgatctacgtcggcaaggcgaaaagcctg
cgcaaccggttggccaactacttccagccgctgtatctgctgcatccgcgcacgcagacg
atggtgctcaccgcacgtagcctcgaatggacggtcgtcggcaccgaactggaggcgctc
actctcgaatacacgtggatcaaggagttcgatccccgtttcaacgtgcagttccgcgac
gacaagacctacccgtatctggcgatatcgtcgggggaggccgtgccccgcgtatgggtc
acccgcagccgcaagagaagggacgcccgctacttcggcccctacgcgaaggtgtgggag
ctgagacaatcgttggacaaactgctgcgcacattcccggtgcgtacctgcacgaccaac
gtgttccacaaggccgaactcaccgggcgaccatgcctgctcgcgtcgattggcaaatgc
tcggcgccatgcatcgggagaatcgcgcccaaggagcaccggcgcatgtgcgagcagctg
gtcggcgtgatgaccggtcggctcggcaagagctacatcgcccagctgacgcgggacatg
aaggacgccagcgccgaactcgaattcgagaaggccgcgcggctgcgcgacgaaatccag
atgctgcagaccgtcatgcagcagaacgcggtcgtattcgatcaggacgtggacgccgac
gtgttcggcatggcatccgacgagcttgaggcgtccgtgcacgccttcatcgtgcgtgac
ggctcgattcgcggagaacgcaactggagcgtcgaacgcgtcgaggacgtatccgacggc
gaactcatcgacgacctgatcatgcaggtgtattcagacgtggccgccgacaacggattg
aacgtcgatcctcatgatggaacggccccttccatggcctcgtcctccgggaacgagggc
gtgccgacggccgaagggggagcctccatcgtggagagacgcgacgccatcggcagcacg
cagacggtgacggccaagagcagcgtcgagcgcgcgcaggcgacacgcacgagacgcgaa
cggcaggaacagaccggtcgcgcggacctgctggcgccaatcgccccagtgccgcgcgag
gtcatcgtgccggtcgagccggcacgccgtgcagaactcgaatcatggttgagcgggctg
cgtggcgccgtggtcaccatccgcgtggcaagccgcggcgagaagaaggcgctgatgaac
cgggcgaacgagaacgccgggcaggcgctgcaacgcagcaagatgagccgcatcagcgac
atgggcacgcgcaccgcggccatgaacgacgtcgcgaaggcactcgggctcgctcaggca
ccgctgcgcatagaatgctacgacatttcgaacaccgtgggcggggcgttccaggtcgcc
tcgatggtcgtgttcgaggacgccatcgccaagaaatccgaataccgcagattcgccatt
cgcggtgatgacggcaagggtgcgctcgacgatctgagcgccctttacgagacgctgacg
cgacggttcagacacggcaacatcgccggcgactccggcgacagcatggacaacgagcgc
cgtgccgaatcgtccgatacatccgcatccacgacgacggcatcgtctcctgacggcata
cgggacgcgggagtcgtccagcagaacacgaaccggcatcatttcgcctacatcccgaat
ctggtcgtcgtcgacggcggccatccgcaggtcatggccgcggcgaaggctctggccgat
tgcggcgtgaacgatgtggccgtctgcggtctggcgaagcgactcgaagaggtctgggtg
ccggacgacgaatacccgatcatcctcaaacgccagtccgaaggcatgtacctgctgcag
cgggtgcgtgacgagtcgcaccgcttcgccatcacctatcatcgtcagacgcgacgcaaa
ggcgcgttgcgctccgcgctggatggcattcccggcgtgggtgagacctaccagaagcgc
ctgctgagccacttcggttcagtgcgtgcgatgcgtgacgccagcgtcgaggaactcgaa
gcggtcaagggtataggccatgccaaagccgaagccatccacaccgcccttcacaccgaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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