KEGG   Bifidobacterium breve JCM 7019: B7019_0730
Entry
B7019_0730        CDS       T03121                                 
Name
(GenBank) Excinuclease ABC subunit B, involved in nucleotide excision repair
  KO
K03702  excinuclease ABC subunit B
Organism
bbrc  Bifidobacterium breve JCM 7019
Pathway
bbrc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B7019_0730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrc03400]
    B7019_0730
DNA repair and recombination proteins [BR:bbrc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B7019_0730
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B7019_0730
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_16 UB2H ZapA AAA_5 nSTAND3 AAA_7 TrwB_AAD_bind AAA_28 KfrA_N DUF87
Other DBs
NCBI-ProteinID: AHJ19022
UniProt: W6F871
Position
885173..887284
AA seq 703 aa
MGFNIERADKPFVVKSPYQPSGDQPQAIAELSERIENGENDVVLMGATGTGKTATTAWLI
EKLQRPTLIIEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS
NINDDVERLRHQATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLKVGQEINRDDLL
RQFVAMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAVRIEFFGDEIDRISTLHPLTGDE
IDEENEVHIFPASHYVAGPERMERALKTIREELDERLAELRKQGKELEAQRLNMRTTYDL
EMLTQVGVCSGVENYSRHFDGRAAGTPPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD
ASRKRTLVEHGFRLPSAMDNRPLKWPEFLQRVGQTVYLSATPGDYELGLSDGVVEQIIRP
TGLLDPKIDVRPVKGQIDDLLGEIKARVDRNERALVTTLTKKMAEDLTDYLLERGIKVEY
LHSDVDTLRRVELLRMLREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL
IQTIGRAARNVSGTVIMYADETTDAMRKAIDETDRRRAKQIAYNKEHGIDPKPLIKKISD
VNDMLAKEDVDTQTLLEGGYRNAGKAGNTHLGVPVLDPNEADKRHEEILKAGLPAQDLAD
LIRQLSEQMHTAAEQLQFELAARLRDEIRDLKKELRQMTEANK
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgggattcaatatcgagcgtgcggacaagcctttcgtcgtcaaatcgccctatcaacca
tctggcgaccagccacaggctatcgccgagctgtctgaacgcatcgaaaacggtgaaaat
gacgtggttctgatgggtgccaccggtactggtaaaaccgccaccaccgcctggctgata
gagaaactgcagcgcccgaccctcatcattgagcccaacaagacgctggccgcgcagctg
tgcgccgaattccgcgaacttatgccggacaacgccgtcagctacttcgtgagctactac
gactactaccagccggaagcctatatcccgcagacggatacctatatagagaaagactcc
aatatcaatgacgatgtggaacggcttcgtcatcaggccaccgcaaacctgctgacccgg
cgtgattgcgtggtggtggccacggtatcctgcatctacggcttgggcacgccggaagaa
tatgccggccgtatgctcttcctcaaggtgggtcaagagatcaaccgtgatgacctgctg
cgtcaatttgttgccatgcaatacaagcgcaacgacatcgccttcacccgcggtacgttc
cgcgtgcggggcgacaccgtcgaaatcatccctgtctacgaggaactggcggtgcgtatc
gaattctttggtgacgagatcgaccgcatttccacgctccatccgttgaccggagacgaa
atcgatgaggaaaacgaggttcacattttcccggcctcgcattatgtggccggtcccgaa
cgcatggaacgggccctgaaaaccattcgcgaggaacttgacgagcgtctggccgagctg
cgcaagcagggcaaggagctggaagcccagcgcctcaacatgcgtaccacctatgatttg
gaaatgctcacccaggtgggtgtctgttccggcgtcgagaactattcgcgtcatttcgac
ggtcgtgccgccggtactccgccgcacacattacttgactttttccctgatgacttcctg
ctggtcattgacgaatcgcatgtcaccgtgccgcagatcggagccatgtatgagggtgac
gcctcccgtaagcgcacgctggtcgagcacggcttcagactgccctccgcaatggataat
cgtccgttgaaatggccggaattcctgcagcgcgtgggccagaccgtatacctctccgcc
acgccaggtgactatgagctgggactttcggatggcgtggtcgagcagatcatccgtccg
accggcctgctggatccgaaaatcgatgtgcgaccggtcaagggtcagattgacgacttg
cttggggagatcaaggcgcgcgtagacaggaacgagcgtgcgctggtcaccacattgacc
aagaagatggccgaggatctgactgactatttgctggaacgtggcatcaaggtcgaatac
ctgcattccgacgtggacacgctgcgtcgtgtcgaactgctgcgcatgctgcgtgagggc
aaaatcgacgtgatagtcggcatcaatctgctgcgagaaggccttgacttgccggaagtc
tccctggtggcgattcttgacgccgataaggaaggcttcctgcgttcctatcgttcgctg
attcagaccatcggtcgtgccgcacgaaacgtgtcaggcacggtgatcatgtatgccgat
gagaccactgatgccatgcgcaaggccattgatgagaccgatcgtcgccgcgctaagcaa
attgcctataacaaggagcacggcattgatccgaagccgttgattaagaagatcagtgac
gtcaacgacatgctggccaaagaggatgtggacacccagaccctgctcgagggcggttat
cgcaatgcgggcaaggccggcaacacgcatctgggcgtgcccgtgctcgatcccaacgaa
gccgacaagcgtcatgaggaaatcctcaaggccggactgcccgcacaggacctggccgat
ttgattcgtcaactctctgaacagatgcacactgccgccgaacagctccaattcgagctc
gccgcccgtctacgcgacgaaatccgcgacctcaaaaaagagctgcgtcaaatgactgag
gcgaataagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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