KEGG   Bifidobacterium breve DSM 20213 = JCM 1192: BBBR_0996
Entry
BBBR_0996         CDS       T04525                                 
Name
(GenBank) putative endonuclease
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
bbrd  Bifidobacterium breve DSM 20213 = JCM 1192
Pathway
bbrd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBBR_0996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrd03400]
    BBBR_0996
Enzymes [BR:bbrd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     BBBR_0996
DNA repair and recombination proteins [BR:bbrd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BBBR_0996
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: BAR00035
Position
complement(1187871..1188725)
AA seq 284 aa
MTGLLIGSHLSTAGGWNELLKRSHEEGGTAFAFFPRSPYGKRSKALDLAGAAVFGAQLRA
EGYGPLVVHAPYVYNLAGKDEAKRAFAIEALAEDIKLLTAIRETGQEVYINIHPGAHVGQ
GAETGCRLISEGLNQVFERTTGVMVLLETMAGKGTECGRNFEELATIMNGVENKANVGVT
FDTCHVLDAGYDLVNDYDGVMRQLDEVIGLAKVKAIHVNDSQFGLDSHKDRHANIGEGQL
GIPFFTRLVNDPIMAKLPMILETKEQTPATHRDEIELLRGLVQK
NT seq 855 nt   +upstreamnt  +downstreamnt
atgacgggtttgcttatcggatcgcatttgtcgacggctggcggctggaacgagctgctg
aaacgctcccatgaggagggcggcaccgcgttcgcgttctttccgcgatctccgtatggc
aaacgttccaaggcgctcgacctggccggcgcggcggtgttcggcgcacagctcagggcc
gaaggctatgggccgttggtcgtccatgcgccgtacgtctacaatctggccggcaaggat
gaggccaagcgcgcatttgccatcgaggcgctggccgaggatatcaagctgctgaccgcc
atccgcgagaccggccaggaggtgtatatcaacattcatcccggcgcgcatgtgggccaa
ggcgccgagaccggctgccggctgattagcgagggactgaatcaggtgttcgaacgtacg
accggcgtcatggtgctgctggagaccatggccggcaaaggcacggaatgcgggcgcaac
ttcgaggagctcgccacgatcatgaacggcgtggagaacaaggcgaacgtcggcgtcaca
ttcgacacctgccatgtgctggatgccggatacgacttggtgaacgactacgacggtgtg
atgcgccagttggatgaggtgatcggcttggccaaggtcaaggcgattcacgtgaacgat
tcgcagttcggcctcgactcgcataaggatcgtcacgccaatatcggcgagggccagctc
ggcatcccgtttttcacgcgactggtcaacgacccgatcatggccaagctcccgatgatc
ctcgaaaccaaggagcagacgcccgccacgcatcgcgacgagatcgagttgttgcgcgga
ttggtgcaaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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