KEGG   Bifidobacterium breve JCM 7017: B7017_0943
Entry
B7017_0943        CDS       T03120                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
bbrj  Bifidobacterium breve JCM 7017
Pathway
bbrj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B7017_0943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrj03400]
    B7017_0943
Enzymes [BR:bbrj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     B7017_0943
DNA repair and recombination proteins [BR:bbrj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     B7017_0943
SSDB
Motif
Pfam: AP_endonuc_2 Glyco_trans_4_4
Other DBs
NCBI-ProteinID: AHJ17449
Position
1127434..1128288
AA seq 284 aa
MTGLLIGSHLSTAGGWNELLKRSHEEGGTAFAFFPRSPYGKRSKALDLAGAAVFGAQLRA
EGYGPLVVHAPYVYNLAGKDEAKRAFAIEALAEDIKLLTAIRETGQEVYINIHPGAHVGQ
GAETGCRLISEGLNQVFERADGVMVLLETMAGKGTECGRNFEELAMIMNGVENKANVGVT
FDTCHVLDAGYDLGNDYDGVMHQLDVVIGLAKVKAIHVNDSQFGLDSHKDRHANIGEGQL
GIPFFTRLVNDPIMAKLPMILETKEQTPTTHRDEIELLRGLVQK
NT seq 855 nt   +upstreamnt  +downstreamnt
atgacgggtttgcttatcggatcgcatttgtcgacggctggcggctggaacgagctgctg
aaacgctcccatgaggagggcggcaccgcgttcgcgttctttccgcgatctccgtatggc
aaacgttccaaggcgctcgacctggccggcgcggcggtgttcggcgcacagctcagggcc
gaaggctatgggccgttggtcgtccatgcgccgtacgtctacaatctggccggcaaggat
gaggccaagcgcgcattcgccatcgaggcgctggccgaggatatcaagctgctgaccgcc
atccgcgagaccggccaggaggtgtatatcaacattcatcccggcgcgcatgtgggccaa
ggcgccgagaccggctgccggctgattagcgaggggctgaatcaggtgtttgagcgtgcg
gatggcgttatggtgttgctggagaccatggccggcaaaggcacggaatgcgggcgcaac
ttcgaggagctcgccatgatcatgaacggcgtggagaacaaggcgaacgtcggcgtcacg
ttcgacacctgccatgtgctggatgccggatacgacttggggaacgactacgatggcgtg
atgcatcagttggatgtggtgatcggattggccaaggtcaaggcgattcacgtgaacgat
tcgcagttcggcctcgactcgcataaggatcgtcacgccaacatcggggagggtcagctc
ggcatcccgtttttcacgcgactggtcaacgacccgatcatggccaagctcccgatgatc
ctcgaaaccaaggagcagacgcccaccacgcatcgcgacgagatcgagttgttgcgcgga
ttggtgcaaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system