KEGG   Bifidobacterium breve 689b: B689b_1005
Entry
B689b_1005        CDS       T03119                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bbrv  Bifidobacterium breve 689b
Pathway
bbrv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbrv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B689b_1005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrv03400]
    B689b_1005
DNA repair and recombination proteins [BR:bbrv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B689b_1005
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR HHH_5 GIY-YIG HHH_2 HHH DUF1995 UPF0758_N DUF4124 IMS_HHH
Other DBs
NCBI-ProteinID: AHJ23028
Position
1208309..1210726
AA seq 805 aa
MTNDIERHSPDEWRKTAAALMPESSSAGAEESAATAKVNANGAPLLGDSRDLFRPKTSDI
PAKPGVYKWRDGQGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVAT
ELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGEQVPRVWVTRSRKRRDTRYFGPY
AKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLLASIGKCSAPCVNQIEADEHRR
LCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARLRDQIQMLETVVQQNAVVFDQ
DVDADVFGFASDELEASVHAFYVRAGSIRGERNWSVERVEDIADTDLMADLLVQVYSDEA
GNDHPQSAAPTAPASGGENAAVLPLAGAGTRSVTGGGAATISTSREAIGSTQTLTAMDAI
ARAQATRERNTRQETTGRVDLLAPIAPVPREIIVPIEPSRRAELESWLTDQRGGAVTIRV
ASRGDKKQLMDRANENANQALQRSKMSRISDMGARTQAMNDVAKALGLNQAPLRIECYDI
SNTVGGAFQVASMVVFEDAIAKKSEYRRFSIRGKDGQGAVDDLSALYETLTRRFKHGNIA
GDSGESIDAEQRAAKAEQQQEQSASDVNGTSSTTPAAITDASSFADSSEVVQQNTNRHHF
AYKPNLVVVDGGKPQVMAAAKALKDCGVDDVAVCGLAKRLEEVWVPDDDYPIILKRQSEG
MYLLQRVRDESHRFAITYHRQQRRKGALRSALDEIPGIGESYQKRLLNHFGSVKAMRMAS
VEDFEQVKGVGHAKAEALYAALHDE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgacgaacgatatcgagcggcatagtccggacgagtggcgcaagactgcggcggcgttg
atgccggaaagctctagtgcaggagccgaagaaagcgcagctacggcgaaggtgaatgcg
aatggggcgcctttgctgggggattctcgtgatctgtttcggcctaagacttcggacatt
ccggccaagcctggtgtgtataagtggcgcgatgggcaagggcgcgtcatttatgtaggc
aaggccaagaacctgcgcaataggcttaccaattatttccagccactgtatctgctgcat
ccgcgcacacagaccatggtgcttacggcacgcagtctggagtggacggttgttgccact
gagttggaatcgttgacgcttgagtacacgtggatcaaggagttcgatccgcggttcaac
gtgcagttccgcgacgacaagacctatccgtatctggcggtcagcacgggggagcaggtt
ccccgcgtgtgggtcacgcggtcgcgcaaacgccgcgatactcgttacttcggcccatac
gccaaggtgtgggagctgaggcacagcctcgatcggctgctgcgcacctttccggtacgt
acctgcaccacgaatgtatttcataaagctcagctgaccggccggccctgcctactggcc
tctatcggcaaatgctcggctccctgcgtgaatcagattgaagcggacgaacatcgacgg
ctgtgcgaacaacttgttggcgtcatgaccggacgccttggacggccgtatatcgcgcag
ttgacccgcgacatgaaagaggccagcgccgagcttgaattcgagaaggcggcccgtctg
cgcgatcagattcagatgctggagaccgtggtgcagcagaacgccgtcgtcttcgatcag
gacgtggacgccgacgtgtttggctttgccagcgacgaattggaagcctccgtgcacgcc
ttctatgtgcgtgccggctcgattcgcggcgaacgcaactggagcgtcgaacgggtcgag
gacatcgctgatactgacttgatggcggatcttctggtgcaggtgtattcggatgaggca
gggaatgaccacccccagtcggctgcgccgacagcccctgctagcgggggcgaaaatgca
gccgtgctcccgctggcgggggctggcacgcgaagcgtgactgggggtggcgctgcaacc
atttccaccagtcgcgaagccatcggctccacgcagacccttacggccatggacgcgatt
gctcgcgcccaggccacccgcgaacgcaatacccgtcaggaaaccaccggccgcgtggat
ctgctggctcccattgcgcctgtgccgcgcgaaatcatcgtgccgatcgaaccctcccgg
cgtgcggaactcgaaagctggctgaccgaccagcgcgggggagcggtgaccattcgcgtg
gcctcccgaggcgacaagaagcagctcatggatcgcgccaacgagaacgccaaccaggcg
ttgcagcgcagcaagatgagccgcatctccgatatgggcgcacgcacccaggccatgaac
gacgtggccaaggccctgggcctgaaccaggcgccgttacgcatcgaatgctacgacatt
tcgaacaccgtgggtggcgccttccaggtggcttccatggtggtgttcgaggacgccatc
gccaagaaatccgaataccgtcgtttttccattcgcggcaaggacgggcaaggagcagtg
gacgatctctccgcgctctacgagacgctgacgcgacgtttcaagcatggtaatatcgcc
ggggattccggcgagagcatcgacgcggagcagcgcgcggccaaggctgagcaacagcag
gaacaatccgcatccgatgtaaatggcaccagcagtacgacgccggcagcaattaccgat
gcctcatcatttgccgattcgtctgaagtggtccagcagaacacgaatcgtcatcacttt
gcatacaagccgaatctcgtggtggtcgatggcggcaaaccgcaggtcatggccgcggcc
aaggctctcaaggattgcggcgtggatgatgtggccgtctgtggcttggccaaacgcctc
gaagaggtatgggtgccggatgatgactatccgatcatcctcaaacgccagtccgaaggc
atgtacctgctgcagcgcgtacgtgacgaatcgcatcgattcgcaatcacctaccatcgc
cagcagcgccgcaaaggcgcgctgcgcagtgcgctcgatgagattccgggtattggagag
agctatcagaaacggctgctcaatcatttcggttcggtcaaagccatgcgtatggccagc
gtcgaggacttcgagcaggtcaaaggtgttggccacgccaaggccgaggcgttgtatgcc
gcgttgcatgacgagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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