KEGG T00528: BBta

Bradyrhizobium sp. BTAi1: BBta_2275

Entry

BBta_2275         CDS       T00528

Name

(GenBank) putative poly(A) polymerase

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

bbt Bradyrhizobium sp. BTAi1

Pathway

bbt03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:bbt00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBta_2275
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbt03019]
    BBta_2275
Enzymes [BR:bbt01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BBta_2275
Messenger RNA biogenesis [BR:bbt03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BBta_2275

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_RNAbd

Other DBs

NCBI-ProteinID:

ABQ34453

RhizoBase:

BBta_2275

UniProt:

A5EE59

Position

2357464..2358717

AA seq 417 aa
MTEVRVLSAPWLSSGPAARVLALLNSDGEEARVVGGAVRNALLGIDIGDIDIATTALPAE
VIRRAKAASIKSVPTGIDHGTVTLVLEGHPFEVTTLREDTETFGRKAKVEFGRDWIGDAH
RRDFTINALSVGPDGVVHDHVGGLADIAARRVRFIGDPAQRIAEDYLRILRFFRIHSAFG
HGVPDRDGYLACIAGRAGLATLSAERVRMEMLKLLVTEGAVGAVTAMTDGGLLTAILGGV
AYLGPFAAMIEIERTLALPPSAVRRLAALAVAVTEDARRLGARLKLSNAETKALDGMGHR
WWRLATADEARARRLLYRLGETVYRDRLMLGWARAGRDHDAQRWRELALLPQRFTPPKLP
LKAADFIARGVAEGPLLGHVLTLAEDAWLAADFPLDEASLSAIADQAAARVNRDGRI

NT seq 1254 nt +upstreamnt +downstreamnt
atgaccgaggtacgggtgctgagcgcgccctggctctcgtccggtccggccgcgcgcgtg
ctggcgctgctcaacagcgacggcgaggaggcccgggtggtcggcggcgccgtccgcaac
gcactgctcggcatcgatatcggcgatatcgacatcgcgaccacggccctcccggcggag
gtgatccgccgcgccaaggccgcctcgatcaagagcgtgccgaccggtatcgaccatggc
accgtgaccttggtgctggaggggcatccattcgaggtcacgaccctgcgcgaggatacc
gagacctttggccgcaaggccaaggtcgagttcggccgcgactggatcggcgacgcgcat
cggcgcgacttcaccatcaatgcgctgtcggtggggccggacggcgtcgtgcacgatcat
gtcggtgggctcgccgacatcgcggcgcggcgcgtgcgcttcatcggcgatccggcacag
cgcatcgcagaggattatttgcgcatcctgcgcttcttccgcatccattcggcgttcggc
cacggcgtgcccgaccgtgacggctatctcgcctgtatcgccggtcgggccgggctcgcc
accttgtcggccgaacgcgtgcggatggagatgctgaagctgctcgtcaccgagggcgcg
gtcggcgcggtcactgcgatgaccgatggcggattgctgaccgcgattctcggcggcgtc
gcttatctgggcccgttcgcggcgatgatcgagatcgaacgcacgctggcgctgccgccg
agcgccgttcggcgccttgcggcgctcgccgtcgccgtcaccgaggatgcgcgccgcctc
ggcgcgcggttgaagctctccaatgccgagaccaaagcgctcgacggcatgggtcaccgc
tggtggcggcttgcgaccgccgacgaggcgcgcgcgcggcgccttctgtatcgtctcggt
gagaccgtctatcgcgaccgtctgatgctgggctgggctcgcgccgggcgggatcacgat
gcgcaacgctggcgcgagctggcgctgttgccgcagcgcttcacgccgccgaagctgccg
ctgaaggcggccgatttcatcgcgcgcggcgtcgcggaagggccgctgcttggccatgtg
ctgacgcttgcggaggatgcctggctcgcggccgacttcccgctcgacgaggcctctctg
agtgcgatcgccgatcaggccgcggcgcgggtgaaccgcgacggacgcatctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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