KEGG   Bradyrhizobium sp. BTAi1: BBta_3371
Entry
BBta_3371         CDS       T00528                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein trbF
  KO
K20531  type IV secretion system protein TrbF
Organism
bbt  Bradyrhizobium sp. BTAi1
Pathway
bbt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bbt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BBta_3371 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bbt02044]
    BBta_3371 (trbF)
Secretion system [BR:bbt02044]
 Type IV secretion system
  Trb secretion system protein
   BBta_3371 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ABQ35470
RhizoBase: BBta_3371
UniProt: A5EH26
Position
3527761..3528444
AA seq 227 aa
MFKRPAVHYGRTLQPVTPYQKAAQVWDERIGSARVQARNWRLMAFGCLTLASGLAAALVW
QSARGSVTPWVVEVGHLGDVQRVAPAIAEYQPTDPQIAFHLARFIEDVRSLPADPIVLRQ
SWLRAYDFTSDRGAAALNDYARTNDPFARLGKAQVSVEVSSVIRASSESFRVAWIERHYD
NGALSATERWTAILTIVLAMPDDADRLRKNPLGVYVHAISWSKELSQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atgttcaaacgtcccgctgtccattacggccgcacgctgcaaccggtcacgccgtatcag
aaagctgcgcaggtctgggatgagcgcatcggctcggcgcgtgtgcaagccaggaattgg
cggctgatggcgttcgggtgcctgacgctggctagcggcctggccgcagccctcgtctgg
caatcggcacgaggcagtgtgacgccctgggtggtggaggtcggccatctcggagacgta
cagcgggtggcccccgcgattgccgagtatcaaccgaccgatccgcagatcgcctttcat
ctcgcgcgcttcatcgaggacgtgagaagcctccccgccgatcccatcgtcctgcgccag
agctggctgcgcgcctatgacttcacgagcgatcgcggggcagcagcgctcaatgactac
gcccggacgaacgatccgttcgcgaggctcggcaaagcccaggtctcggtggaggtctcc
agcgtcatccgggcctcgtccgagagctttcgcgtggcatggatcgagcggcactacgac
aatggcgcgctgagtgcgacggagcgctggaccgccattctcaccatcgtgctcgcgatg
cctgacgatgccgaccggctgcgcaagaaccctcttggggtttatgtccacgccatcagc
tggtcgaaggagctgtcgcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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