KEGG   Borreliella burgdorferi B31: BB_0771
Entry
BB_0771           CDS       T00012                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor (rpoS)
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
bbu  Borreliella burgdorferi B31
Brite
KEGG Orthology (KO) [BR:bbu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbu03021]
    BB_0771 (rpoS)
Transcription machinery [BR:bbu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BB_0771 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3 HTH_10 GerE HTH_23 HTH_28 Phage_terminase Sigma70_r4_2 KORA Homeodomain Fe_dep_repress Formin_GBD_N V-SNARE_C HTH_Tnp_ISL3 ENT
Other DBs
NCBI-ProteinID: AAC67109
UniProt: O51712
Position
complement(812439..813239)
AA seq 266 aa
MNIFSNEDLNIYLKSVREHKLITHEEEIKLAGQIQRGNAKAKNKMINANLRLVLKIIKRY
AGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFWIKQSLQRALNTKTRLVKVPY
RKENLILQINKYLTEEEKSPKKEEIMKRFNLSPAQYIKIIPYLEKEYSLDKEIEGSENST
LLNLYEDNSFNPEITLEQDSTLKHLNYILETKLNEKERYIIKKRYNLDNSPKKSTLKDIS
TELGISSETVRQIEKRVLKKLKEEIN
NT seq 801 nt   +upstreamnt  +downstreamnt
atgaacatatttagtaatgaggatttaaacatatatttaaaatcagtaagagaacacaag
ctaattactcacgaagaagaaatcaaacttgcaggacaaatacaaagaggcaatgcaaaa
gcaaaaaacaagatgataaatgcaaacttgcgacttgttttaaaaataataaaaagatat
gcgggtaaagggttaaaaattgaagacttaattcaagaaggcaacttgggattaataaga
gctgctgaaaaatatgacccgaataaaaataccaaattttcaacttatgcatcattttgg
attaagcaatcactacaaagagcattaaacactaaaaccagattggtaaaagtcccatac
agaaaagaaaatctaatactacaaataaataaatatttaacagaagaagaaaaatcgccc
aaaaaagaagaaataatgaaaagattcaacctatctcctgctcagtatataaaaattatt
ccctatcttgaaaaagaatattctctggacaaagaaatagagggatctgaaaattcaaca
ctcttgaatctatacgaggataattcttttaaccctgaaattacccttgaacaagattca
actctaaaacatttgaattatatacttgaaacaaaattaaatgaaaaggaaagatacata
attaaaaaaagatataacctggacaatagtcccaaaaaaagcaccttaaaagatatttca
acagaacttggaatatcatcagaaactgtaagacagattgaaaaaagagttcttaaaaaa
ttaaaagaagaaataaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (119)   

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