KEGG   Bubalus bubalis (water buffalo): 102389047
Entry
102389047         CDS       T05912                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X2
  KO
K06237  collagen type IV alpha
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04151  PI3K-Akt signaling pathway
bbub04510  Focal adhesion
bbub04512  ECM-receptor interaction
bbub04820  Cytoskeleton in muscle cells
bbub04926  Relaxin signaling pathway
bbub04933  AGE-RAGE signaling pathway in diabetic complications
bbub04974  Protein digestion and absorption
bbub05146  Amoebiasis
bbub05165  Human papillomavirus infection
bbub05200  Pathways in cancer
bbub05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102389047 (COL4A4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102389047 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102389047 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102389047 (COL4A4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    102389047 (COL4A4)
  09154 Digestive system
   04974 Protein digestion and absorption
    102389047 (COL4A4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102389047 (COL4A4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    102389047 (COL4A4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102389047 (COL4A4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102389047 (COL4A4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    102389047 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bbub04147]
    102389047 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:bbub00536]
    102389047 (COL4A4)
Exosome [BR:bbub04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102389047 (COL4A4)
Glycosaminoglycan binding proteins [BR:bbub00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102389047 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102389047
NCBI-ProteinID: XP_044793834
EnsemblRapid: ENSBBUG00015002096
Position
2:complement(167449865..167601208)
AA seq 1645 aa
MALVRCPFRCNKLLATNSWSLILILFSVQYAYGGGKKFIGLCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPIGIPGEKGMKGDSGRPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGRPGIDGYNGSRGDPGIPGERGALGPRGPPGLPGEKGEKGNSVFILGATKGM
QGDRGDPGPPGSPGSRGVRGPAGPAGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGMPGMTGPPGPPGHRGEPGIGRKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEPGLFGDPGSFGFLGPKGDPGDRGHPGPPGVLVTPSLPL
KGPPGDPGHPGHYGETGAVGPRGPPGAPGRPGEACPGMTGPPGPRGFPGHPGFPGAAGVP
GRADSAPGKPGNQGPTGLPGVPGLPGPPGSDVVYCTVGQPGPQGIKGKVGPPGRRGSKGE
KGSSGLCACQPGPMGPSGPPGPPGRQGSKGDLGLPGWLGEKGSPGPPGAKGSPGPPGKPG
ASGLPGSKGEKGDMVVSRVKGHKGERGPDGPPGLPGQQGQHGRDGYAGEKGDTGPPGDHE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGDRGQPGAPGCPGNRGPDGRKGRKGDT
IPCNVTYPGRPGPPGFDGPPGPKGLPGHRGAPGLRCLDGQKGQRGKPGISERPGPPGFRG
DIGEPGSGGEKGSSPVGPPGAPGSPGVNGQKGHPGDPAIGYPGLPGKSGLPGAPGSKGLR
GDDGRPGTTGPAGMPGFPGLQGPKGREGNAGFPGIPGLPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDMGPLGPAGMKGLPGVPGWPGADGTPGLPGVPGPTGDDGLPGLPGPK
GPQGLPGFLGFPGERGKPGQDGHPGRKGEHGEKGWPGFLGDRGLKGVKGARGPPGYEGEM
DIISKKGETGEPGASGDGGFPGENGDKGHPGMQGRRGEPGSHGPPGFHPGEPGRNGQPGL
PGPPGPPGSPGLRGNIGFPGFPGDQGEPGSPGCPGPSGMDGTRGPKGYKGESASQFGLPG
PKGEPGGPGYPGRLGASGEQGLPGAQGPGGPPGRPGPPGLFGPTGCPGSPGGPGLQGPPG
EAGDPGPRGVLGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGASGSHEMGPPGPVGM
PGPKGETGDPGNPGISPPGLFGERGPPGPPGPPGRAGLPGPPGAPGKALKGDIPDTGLPG
DQGPPGPDGPRGVPGPPGPPGSVDLLKGEPGDCGLPGPPGLPGPPGPPGHKGFPGCDGKH
GQKGPMGFPGPQGPPGSPGPPGDKGLPGPPGRRGPLGPPGSRGEPGPPADLDACPRIPGL
PGVPGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCP
GAPGPPGPMGDPGPIGFGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYLEGQER
AHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPMTPLSEDEIRP
YISRCAVCEAPAQAVAVHSQDQSIPPCPRTWRSLWIGYSFLMVRLQSRPTAPQRTLSLHP
HNGISCREVTELSLCAWEKMKGRLN
NT seq 4938 nt   +upstreamnt  +downstreamnt
atggcactggtaaggtgtcctttcaggtgcaacaagctcttggccaccaattcctggtca
ctcatacttattctgttttctgtacaatatgcatatgggggtggaaagaagtttattggt
ctctgtggaggaagagattgctctctttgccagtgctttcctgaaaagggatctcggggt
caaccgggaccaccagggccacagggtcctattggacccctgggaccaccgggacccatt
gggatcccaggagagaaagggatgaaaggtgacagtggccgtcctggagcagcaggtgac
aaaggtgacaagggtccaaccggagttcctggatttccaggtctggatgggatacctggg
cacccagggcctcctggatccagaggcagacctggcatagatggctacaatggctcaaga
ggtgatccagggattccaggagaaagaggagctcttggcccacgaggccccccaggcctt
cctggagaaaaaggagaaaaaggaaattcagtgttcattttaggtgccactaaaggtatg
cagggcgacagaggggacccaggacctcccggctcaccaggatcaaggggagtgagaggc
ccagcaggcccagcggggtacccgggagagcccgggttagcaggacctccaggcccccct
ggcagtccaggcttaaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgaggttggccaacaaggttctccaggacccactctgttggtgcagccacctgattct
ggtctctataaaggagaaaagggtattaaaggaatgcctggaatgactggacctcctgga
ccaccgggacacaggggagagcctggtattggaagaaaaggagagaaagggattcctggg
tttccaggacctcggggggaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtttggagatcctgggtcatttggatttcttggcccaaagggagat
cctggagaccgtgggcacccaggaccaccaggggttttggtaactccatctcttccactc
aaaggccctccaggggatccagggcaccccggccactatggagaaacaggggctgttgga
ccacgtggtcctcctggtgccccaggtcgaccaggggaagcctgtccaggcatgacggga
cctcctgggccacgagggtttcctggtcatccaggatttccaggggcagctggggttcct
ggaagagctgattctgctccaggaaaaccaggcaaccagggaccaactgggctgcctgga
gtgccgggactgccgggacctccgggatcagatgttgtatattgtactgttgggcaaccc
ggaccacaaggaataaaaggcaaagtgggtcctccaggaagacgaggctccaaaggagaa
aaagggagctcagggctctgtgcctgccagcctggtcccatgggcccatcaggccctcca
gggcctcctgggaggcaagggagtaagggagacttggggctccctgggtggcttggagaa
aaaggttccccaggccctcctggtgccaaaggatctccagggccaccgggaaaacctggt
gcctcaggactacctggcagcaaaggagaaaaaggtgacatggttgtatcaagagtgaaa
ggacacaaaggagaaagagggcctgatgggccccctggacttccagggcagcagggacaa
catggccgagatggatatgctggagaaaagggggacacggggccgcctggtgatcacgag
gatgcagccccaggtgataaagggcctcctggaccgccagggccccctggcagagcggga
cctagggggcccccaggcctgggatttcctggccctccaggagacagagggcaaccagga
gctccaggctgcccaggcaacaggggtcctgatggccggaagggtcggaaaggtgataca
attccttgtaacgtaacataccctgggaggccaggccctccaggttttgatggtcctcca
ggtccaaagggccttccaggtcatcggggtgctcctgggctgaggtgtttggatggacaa
aagggtcaacgtggcaaaccaggaatctcagaaagacctggtccacctggtttccgtggt
gatataggagaaccaggttcgggaggtgaaaaggggtcctcccctgttgggcccccagga
gctccaggttcacctggagtgaatggtcagaaaggacacccaggagatcctgctatcggc
tacccaggacttccgggaaagagcggacttccaggagcaccagggtccaaaggactcaga
ggcgatgacgggcgtccagggaccacagggccagctggcatgcccggatttccaggtctc
caaggtcccaagggccgagagggaaatgctgggtttccagggatcccaggcctacctggt
cactcctgtgaaagaggtgctccagggataccagggcaaccggggctccccggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggacatgggacctctgggacct
gctggaatgaagggccttcctggagtcccgggatggccgggggcagatggaaccccaggt
cttccaggggtcccaggccccactggagacgatgggctacctggtcttccaggcccaaag
ggaccccaggggctgcctggcttcctgggttttccaggagagagaggaaaacctggtcag
gatggacaccctggcagaaagggagaacacggagagaagggttggcctggcttcctggga
gaccgaggattgaaaggtgtcaaaggagcaagaggacccccgggatatgaaggagaaatg
gatattatttccaagaagggggaaactggagaacctggagcttctggggatggtggattc
ccaggagaaaatggtgataaaggtcatcctgggatgcaaggaaggagaggagagccagga
agccatggaccacctggatttcaccctggggagcctggaagaaatggacagccagggctt
cctggacccccaggccctccaggctcacctgggctgagaggcaacattggttttccagga
tttccgggtgaccagggtgagccaggttctccagggtgcccgggaccttcaggaatggat
ggtaccagaggacctaaaggatacaaaggggaatctgcaagtcagtttggcctacctggt
ccaaagggtgagccaggtggccccggatatccaggacgtttgggagcatctggagagcag
ggcttgcccggtgctcaaggtcctggaggaccacccggaaggccaggacctcctggcttg
tttggaccaacaggatgtccaggtagtccaggggggcctgggctgcagggacccccagga
gaagcgggggatcctggaccaagaggcgtcctgggggacccaggggcaccaggtcttcca
ggaataaaaggtccctctgggtcgcccggcctgaacggcctgcatggtttgaagggtcag
aaaggcagcaaaggcgcttcaggttcgcatgaaatgggccccccaggtccagtgggaatg
cctggccctaaaggggagacaggagaccccgggaacccaggaatttctcctccaggactt
tttggagaaagaggtcccccgggtcccccaggacccccagggcgagctggactgcctggt
cctccaggtgccccaggaaaagctcttaagggtgacattccagacacgggtctgcctgga
gatcaggggcctcctggccccgatggtccaagaggagtacccgggcctccaggaccacct
gggagtgtcgaccttctgaaaggagaaccaggagactgtggtctgccggggcctccaggt
ctcccaggcccaccaggccctccaggacacaagggcttcccaggatgtgatggaaaacat
ggccagaaaggaccaatgggattcccggggccgcaggggccacctggaagtcctgggcca
cctggagacaaaggtttacctggacctccaggcagacgagggcctttgggtcctccgggt
tccagaggtgagcctgggcccccagcagacttggatgcatgcccccgaatcccagggctt
cctggggtaccaggcccgagaggaccggaaggaaccatggggcttcctggcatgagaggc
ccgccgggaccaggatgcaaaggagagcctgggctggatggcaggaggggtgaggatggc
ctcccagggtcccctgggcctccgggacataaaggtgacatgggagaagcaggctgtcca
ggagcaccaggccctcctgggcccatgggggatcctgggcccatagggtttggcccggga
tacctcagtggcttcctcctggttctccacagtcagacggatggagaacccacctgcccc
atgggcatgcccaggctctggactgggtatagtttgctatacctggaaggacaggagaga
gctcacaatcaagacctaggtctggcgggctcctgcctgcccatctttagcacgctgccc
ttcgcctactgcaacatccaccaggtgtgccactatgcccggaggaacgacaggtcctac
tggctggcgagcacagcgcctctgcccatgactccactctcggaggatgagatccgcccg
tacatcagccgctgcgcagtgtgcgaggcccccgcccaggccgtggcggtgcacagccaa
gaccagtccatccccccgtgtccgcggacctggaggagcctctggatcgggtactccttc
ctcatggtacgcctacagagccgccccacagccccacaaaggacactttccctccatcca
cataatggcatctcatgcagggaagtgacagagctatcattatgcgcttgggagaaaatg
aagggccgacttaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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