KEGG   Bubalus bubalis (water buffalo): 102391778
Entry
102391778         CDS       T05912                                 
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04060  Cytokine-cytokine receptor interaction
bbub04061  Viral protein interaction with cytokine and cytokine receptor
bbub04064  NF-kappa B signaling pathway
bbub04668  TNF signaling pathway
bbub04940  Type I diabetes mellitus
bbub05166  Human T-cell leukemia virus 1 infection
bbub05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    102391778 (LTA)
   04668 TNF signaling pathway
    102391778 (LTA)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102391778 (LTA)
   04061 Viral protein interaction with cytokine and cytokine receptor
    102391778 (LTA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102391778 (LTA)
   05168 Herpes simplex virus 1 infection
    102391778 (LTA)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102391778 (LTA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:bbub04052]
    102391778 (LTA)
Cytokines and neuropeptides [BR:bbub04052]
 Cytokines
  Tumor necrosis fators
   102391778 (LTA)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 102391778
NCBI-ProteinID: XP_044784464
EnsemblRapid: ENSBBUG00015014147
Position
2:24715671..24719005
AA seq 204 aa
MTPPGRLYLLRVCSTPPLLLLGLLLALPPEAQGLRGVGLTPSAAQPAHQQLPKPFTRGTL
KPAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCF
PRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQL
STHTDGISHLLLSPSSVFFGAFAL
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacaccacctggacgtctctacctcctgagggtgtgcagcaccccacccctcctcctc
ctggggctgctgctggccctgccgccggaggcccaggggctccgtggtgttggcctcaca
ccctcagctgcacagcctgcccatcagcaactcccgaagcccttcacccgtggcaccctc
aaacccgccgctcaccttgttggagaccccagcacccaggactcgctgcgctggagggca
aacacggaccgcgccttcctccgccacggcttctctctgagcaacaactccctcctggtc
cccaccagtggcctgtacttcgtctactcccaagtggtcttctccgggagaggctgcttc
cccagggccacccccacccctctctacctggcccatgaggtccagctgttttccccccag
taccccttccacgtgcctctcctcagtgctcagaagtccgtgtgcccagggccacagggg
ccgtgggtgcgctcggtgtaccagggggctgtattcctgctcacccggggagaccagcta
tccactcacacagacggcatctcccacctgctcctcagccccagtagtgtcttctttgga
gccttcgctctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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