KEGG   Bubalus bubalis (water buffalo): 102395338
Entry
102395338         CDS       T05912                                 
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X2
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bbub01009]
    102395338 (VPS54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bbub04131]
    102395338 (VPS54)
Protein phosphatases and associated proteins [BR:bbub01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102395338 (VPS54)
Membrane trafficking [BR:bbub04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    102395338 (VPS54)
SSDB
Motif
Pfam: Vps54 Vps54_N SBP_bac_6 EXOC6_Sec15_N DCP1
Other DBs
NCBI-GeneID: 102395338
NCBI-ProteinID: XP_006064855
EnsemblRapid: ENSBBUG00015017479
Position
12:complement(61886851..61988614)
AA seq 965 aa
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTVTDQHRWTIYHSKVN
LPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVYQQEISQREKIHE
RCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAG
GKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLKKTSQAV
KMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEF
VGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLED
DCQILEEERLISLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINKVSQIEDIDTDVV
LKLADQMRMLNFPQWFDLLTDIFSKFIIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEI
SQQKNAAKDNSLDTEVAYLIHEGMFISDAFSESELTPIAIDTTSQRNASPNSEPCSSDSV
SEPECTTDSSSSKEQISSSVTPGAVDIMVNEDVKLSDLELGKLANNIQELLYSASDICHD
RAVKFLMSRAKDGFLEKLNSTEFISLSRLMETFILETEQICGRKSMSLLGALQSQANKFV
NRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKSGATEERKPAEVL
TVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAG
ALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHFDHITKDYHD
HIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIFDLLPEEQTQM
LFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLQDLDLNMAEI
WEQKR
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagacccgacaaaacacattcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacagttacagatcaacatagatggactatatatcattccaaagtaaat
ctcccagcagcattaaatgatcctagattagcaaaaagagaatctgacttcttcacaaaa
acatggggattggactttgtggacactgaagtcataccttcattctacctcccacagatc
agcaaggaacattttacagtatatcaacaggaaatctctcagagagaaaagattcatgag
agatgcaagaatatttgtcctcctaaagatacctttgacagaactctcttacatactcat
gataaatccaggacagatctggagcaagtacctaagatttttatgaaaccagattttgcc
ttggacgattccttaacttttaattcagttttaccatggtctcattttaatactgctggt
ggaaaaggaaatcgtgatgcagcttcctcaaagttgctacaagaaaagctgagccattat
ctggatattgtggaagtaaacattgctcaccagatctctttacgttcagaagcatttttt
catgcaatgacctctcaacacgaattgcaggactacctcaagaaaacttcccaggctgta
aaaatgcttcgagataaaattgcacagattgataaagtaatgtgtgaaggatcactacac
attttaagactggcacttaccagaaataattgtgttaaagtatacaataaactgaagtta
atggccactgtacaccagactcagcctacagtacaggtgttgttatctacttctgaattt
gttggagcattggacttaatagcaacaacacaagaggttctacagcaagaacttcagggc
attcatagcttccggcatttgggatcacagctttgtgaattagaaaaactgatagataaa
atgatgattgcagaattttctacttattctcacagtgacttaaatagaccattggaagat
gactgtcaaattttagaagaggaaagactaatctctcttgtatttggacttttaaaacaa
agaaaacttaattttttagaaatatatagtgaagaaatgattattacagcaaagaatatc
attaaacagtgtgtgattaataaagtttcacaaatagaagatatagacacagatgttgtt
ttgaagcttgcagatcagatgagaatgttgaattttcctcagtggtttgatttactaacg
gatattttctccaagtttataattttcctacagagagttaaggcaaccttaaatatcatt
catagtgttgttctctcagttcttgacaaaaaccaaaggactagagaattggaagagatt
tcacaacagaaaaatgctgcaaaagataattcactagacacagaagtggcttatttaatc
catgaaggcatgtttataagtgatgcatttagtgagagtgaattaacacctatagccata
gatactacctctcaaagaaatgcatctccaaatagtgagccctgcagcagtgattctgta
tccgaaccagaatgtactactgattcttcatccagcaaagagcagatatcatcatctgtt
actccaggagctgtggatattatggtcaatgaagatgtgaaattaagtgacttagagcta
ggaaagctggcaaataatatccaggagttattatatagtgcctcagatatatgccatgat
cgagccgtcaaatttctcatgtcaagagcaaaggatggttttcttgagaagctaaattcc
acggaattcatatcactttccagattaatggaaacattcattttagagactgaacagata
tgtggaagaaaaagcatgtcattacttggagcacttcagagccaagcaaataaatttgta
aataggtttcatgaagagagaaaaaccaaactcagccttctcttagacaatgaacgctgg
aagcaagctgatgttcctgcagaatttcaggatcttgttgattctatatcagatggaaag
attgctttacctgaaaaaaaatcaggggctacagaagaaagaaaaccagctgaagttctt
actgttgaggggcaacagtatgctgttgttggaactgtattgctgttgataagaattatc
cttgaatattgccagtgtgtggataatatcccatctgttactactgacatgctcactcgt
ctgtcagacttattgaagtacttcaattcaagaagttgccagttagttcttggagctggt
gcactgcaagttgttggactaaaaacaataactacaaaaaatttggctctttcttcacgc
tgtttgcagttaattgtgcactacattcctgtgatccgggctcattttgaagctcgactg
caacctaagcaatacagtatgcttaggcattttgatcatatcactaaggactaccatgac
cacatagctgaaatatcagctaagcttgtagcgataatggatagcttatttgacaagctg
ttatctaagtatgaagtgaaagctcccgttccttctgcctgtttcaggaatatttgtaag
caaatggcaaaaatgcatgaagctatatttgatctccttcctgaagaacaaacgcaaatg
ttatttttaagaattaatgcaagttacaaactccacttgaaaaagcagttatctcactta
aatgtgataaatgatggaggacctcaaaatgggttggtcacagcagatgtagctttttac
actggaaatcttcaagccttaaaaggccttcaagatttggacctaaatatggccgagatc
tgggaacagaaaaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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