KEGG   Bubalus bubalis (water buffalo): 102398631
Entry
102398631         CDS       T05912                                 
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X2
  KO
K09444  interferon regulatory factor 1
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04625  C-type lectin receptor signaling pathway
bbub04668  TNF signaling pathway
bbub04917  Prolactin signaling pathway
bbub05133  Pertussis
bbub05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    102398631 (IRF1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    102398631 (IRF1)
  09152 Endocrine system
   04917 Prolactin signaling pathway
    102398631 (IRF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102398631 (IRF1)
  09171 Infectious disease: bacterial
   05133 Pertussis
    102398631 (IRF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bbub03000]
    102398631 (IRF1)
Transcription factors [BR:bbub03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    102398631 (IRF1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 102398631
NCBI-ProteinID: XP_025148861
EnsemblRapid: ENSBBUG00015012672
Position
9:complement(89282867..89290925)
AA seq 281 aa
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKSQR
KERKSKSSRDARSKAKKKPYGEYSPDTFSDGLSSSTLPDDHSNYTVRSYMGQDLDIERTL
TPAATDEDEEGKLTEDIMKLLEQTGWQQTSVDGKGYLLNEPGAQPTSVYGEFSCKEEPEV
DSPGGYIGLISSDMKNMDPSWLDSLLTPVRLPSIQAIPCAP
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcccatcactcggatgcgcatgagaccttggctagagatgcagattaattccaaccaa
atcccagggctgatctggattaataaagaggagatgatcttccagatcccatggaagcac
gctgcgaagcatggctgggacatcaacaaggacgcctgtctgtttcggagctgggccatt
cacacaggccgatacaaagcaggggaaaaggagccggatcccaagacctggaaggccaac
tttcgctgcgccatgaactcgctgccagatattgaggaggtgaaggaccagagcaggaac
aagggcagttcagctgtgcgggtgtaccggatgctcccacccctcaccaagagccagagg
aaagagagaaagtccaagtccagccgagacgctaggagcaaggccaagaagaagccatat
ggggaatacagccccgataccttctctgatggactcagtagctccacccttcctgatgac
cacagcaactacacagttcgcagctacatggggcaggacctggacatcgaacggactctc
actccagctgcaacagatgaggacgaggaagggaaattaactgaggacatcatgaagctc
ttggagcaaacagggtggcagcagacaagcgtggatgggaaggggtacctgcttaatgaa
cccggggcccagcccacctctgtctatggagagttcagttgcaaggaggagccagaagtt
gacagccctgggggttatattggcctgatatcttcagatatgaagaacatggatcccagc
tggttggacagcctgctcaccccagtcaggctgccctccatccaggccattccttgcgca
ccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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