KEGG   Bubalus bubalis (water buffalo): 102402123
Entry
102402123         CDS       T05912                                 
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbub03016]
    102402123 (TSEN34)
Enzymes [BR:bbub01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     102402123 (TSEN34)
Transfer RNA biogenesis [BR:bbub03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    102402123 (TSEN34)
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 102402123
NCBI-ProteinID: XP_044786979
EnsemblRapid: ENSBBUG00015016135
Position
18:complement(63151212..63155290)
AA seq 311 aa
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL
AEIGAVTLVSAPRPDPRQHSLALASFKRQQEQGFQEQSALAAEARETRRQELLEKITEGQ
AAKKLKLEQESGTSGSQEAGGKQAAEENEASAGQAAGEHEEAHEGSSPQPGPSNGVAPLP
KSALLIQLATARPRPIKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGK
FGGDFLVYPGDPLRFHAHYIAQCWAPEDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGKV
VYTSLQWASLQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atgctggtggtggaggtggcgaacggccgttccctggtgtggggggccgaggccgtgcag
gcgctgcgggagcgcctgggcgtggggggccgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggcctcccactgctgctgatgcctgaggaggcgcgactgctg
gccgagatcggcgcagtgaccctggtcagcgccccgcgcccggacccccgtcaacacagc
ctggcactggcatccttcaaacgccagcaagagcagggcttccaggaacaaagcgctctg
gcagctgaggcccgagagacccgtcgtcaggagctactagagaagattacagagggccag
gctgcgaagaagctaaagctggaacaggaatcagggaccagtgggagccaggaggccggt
gggaagcaagctgccgaagagaatgaggccagtgctggccaggctgctggagagcatgag
gaagcacatgaaggctcctctccccagccagggccttcaaatggagtggcccccttaccg
aagtctgctctgctcatccagttggccactgctcggccgcggcccatcaaggctaggccc
ctggactggcgtgtgcagtccaaagactggccccacgctggccgccctgcccacgagctt
cgctacagcatctacagagacctgtgggaacgaggcttcttcctcagtgccgctggcaag
tttgggggtgacttcctggtctatcccggtgacccgctccgtttccacgctcactacatc
gcccagtgctgggctccagaggatcccataccactccaggacctggtttcggctggccgc
ctgggcaccagtgtcagaaagacgctgctgctttgctccccgcagcccgatggtaaggtg
gtctacacgtccctgcagtgggccagcctgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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