KEGG   Bubalus bubalis (water buffalo): 102408849
Entry
102408849         CDS       T05912                                 
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102408849 (APLF)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102408849 (APLF)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102408849 (APLF)
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 102408849
NCBI-ProteinID: XP_006077712
EnsemblRapid: ENSBBUG00015020391
Position
12:66432129..66535027
AA seq 509 aa
MSGGFELQPQDGGPRVALAPGETVIGRGPLLGITDKRVSRSHAILEVVGGKLRIKPLHRN
PCYYQSSEKSQLLPLKTNIWRWLNPGDRFSLLVDKYIFCVLSTHSEMEMECTLRNSQMLD
EDDILNEIPKSSSADLPDKTPSAPQRERSTETAKPQATANNVSFIGESRDLSKQQPNPSE
RKRILPAWMLTENSSDQNLSVISGGNNVTRESEKERVCKDKTQVNITQPGKKRLISSGSS
ESTSAEQDTGKKCKNDDQEESIISSKEMTQSFSAATLHNTEIDNTKTNPQRSEVPVEALG
KVSEHKIITKGSSNEDSMARSCSESYSSTQSKSFCDKPQKSHPESSSNPPSPECVQAKAT
DSVPNASEENKVQRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVNITCQDEADDRPECP
YGASCYRKNPQHKIEYRHSTFPVRSISDEDDSVGQPNEYNLNDSFIDDEEEEYEPTDEDS
DWEPEKEDLEKEDMEGLLKEAKKFMKRKK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtccgggggcttcgagctgcagccgcaggacggcggcccccgggtggccctggcgccc
ggggagacggtcatcggccgcgggccgcttctgggaataacagataagagagtgtccaga
agccatgccattcttgaagtggtgggtggtaagcttcgaatcaaaccgctacacagaaat
ccatgttattatcagtcttctgagaagagccagctcttaccattgaagacaaatatctgg
cgctggttgaatcctggagatcgcttttctttattagttgacaaatacattttctgtgtc
ttgtctacacattctgaaatggaaatggagtgtactttaagaaatagtcaaatgcttgat
gaagatgatatattgaatgaaataccaaaatcttcctcagctgatttgcctgataaaacc
cccagtgccccacaacgggaaagaagcacagaaacagcaaagccccaggccactgcaaat
aatgtgtctttcataggtgaaagtagagacttgagtaagcaacagccaaatccttccgag
aggaaaagaatcctcccagcatggatgttaacagaaaattcaagtgatcagaacctttca
gtcatcagtggaggtaataatgtaactcgggaaagtgaaaaagaaagagtctgcaaagat
aaaacccaagtaaacataacacagccaggaaaaaagcgattaatttcatcaggaagttca
gaaagtacatcagcagagcaagacacaggaaaaaagtgcaaaaatgatgatcaggaagag
tctatcatttcatccaaggaaatgacacagtcattttctgcagccacgttacataacaca
gagatagataacactaagactaatccacagagaagcgaagtcccagtagaggcacttggt
aaggtttctgaacataaaatcatcactaagggaagttcaaatgaagacagcatggcgaga
agttgttctgagagttattccagtacccagagcaagtctttctgtgacaagcctcaaaaa
tctcatcctgagtccagctctaatccgcccagtcctgaatgtgtgcaggcgaaggcaacc
gattcagttccaaatgcttctgaagaaaacaaggtacagagaacgtcctgcatgtatggg
gcaaactgctacaggaaaaatcctgtccattttcaacacttcagtcaccctggtgatagt
gattatggaggtgtaaacatcacgtgtcaagatgaagctgatgaccggcctgaatgtccc
tatggagcatcttgttataggaagaatccccagcacaagatagaatatagacatagtaca
tttccagtgagaagcatttcggatgaagatgacagtgttgggcaacccaatgaatacaac
ctgaatgacagctttatagatgatgaggaagaagaatacgagccaacagacgaagattcc
gactgggaaccagaaaaggaagacctagagaaggaagatatggaagggcttttgaaagaa
gcaaaaaagtttatgaaaagaaaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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