KEGG   Bubalus bubalis (water buffalo): 102409867
Entry
102409867         CDS       T05912                                 
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102409867 (DDX41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbub03041]
    102409867 (DDX41)
Enzymes [BR:bbub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102409867 (DDX41)
Spliceosome [BR:bbub03041]
 Complex C
  Other components
   Complex C specific factors
    102409867 (DDX41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 102409867
NCBI-ProteinID: XP_006042959
EnsemblRapid: ENSBBUG00015005910
Position
9:72116258..72121921
AA seq 627 aa
MRAARMAESEPERKRARTDEATATGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRR
KGAAEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEK
ILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDG
IPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF
TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA
LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE
GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV
KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI
EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTF
INKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLEIGGERGCAFCGGLGHRITDC
PKLEAMQTKQVSNIGRKDYLAHSSMDF
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgcgtgcagcaaggatggcggaatcggaacctgagcggaagcgggctcgcaccgacgag
gcgactgccacaggaagccgctctgaggcagaggatgaggacgacgaggactacgtgcct
tacgtgccgttgcgacagcgccggcaactgctgctccagaagctgctgcagcgaagacgc
aagggagctgcggaagaggagcagcaggacagcggcagcgagccccgaggagatgaggac
gacatcccattgggtcctcagtccaacgtcagcctcttggatcagcaccagcatctcaaa
gagaaggctgaagcccgcaaggagtctgccaaagagaagcagctgaaggaagaggagaag
atcctggagagtgtggccgaaggtcgagctttgatgtcagtgaaggagatggctaaggga
atcacatacgatgatccaatcaaaaccagttggacaccaccccgttacgtcctgagtatg
tctgaagagcggcatgaacgtgtccggaagaagtaccacatcttggtggaaggcgatggc
atcccaccacccattaagagcttcaaagaaatgaaatttcctgcagccatcctgagaggc
ctgaagaagaagggcatccaccacccaacacccattcagatccagggaatccccaccatt
ctctctggccgcgacatgataggcatagcctttaccggctcaggcaagacactggtgttc
actttgcccgtcatcatgttctgcctcgaacaagagaaaaggttacctttctctaagcgt
gaagggccctatggactcattatctgcccttcgcgggagctggcccgacagacccatggc
atcctggagtactactgccgcctgctgcaggaagacagctcaccactcctgcgctgcgcc
ctctgcatcgggggcatgtctgtcaaagagcagatggagaccatccgacatggtgtgcat
atgatggtggccacccctgggcgcctcatggatctgctgcagaagaagatggtcagcctg
gacatctgtcgttacctggccctggacgaggctgaccgcatgattgacatgggcttcgag
ggcgacatccgcaccatcttctcctacttcaagggccagcgacagaccctcctcttcagt
gccaccatgcctaagaagattcagaactttgccaagagcgccctggtaaagcctgtcacg
atcaatgtggggcgtgccggggccgccagcctggatgtcatccaggaagtggaatacgtg
aaggaggaagctaagatggtatacctgcttgagtgcctgcagaagacaccgccgcccgtg
ctcatctttgcagagaagaaagcagatgtggacgccatccatgagtacttgctgctcaag
ggagtggaggctgttgccatccatgggggcaaagaccaggaggaacggaccaaggctatc
gaggcattccgggagggcaagaaggatgtccttgtggccacagatgtagcctccaagggc
ttggacttccctgccatccagcacgtcatcaattatgacatgcctgaggagatcgagaac
tacgtgcaccgtattggccgaactgggcgctcaggaaacacgggcatcgccactaccttc
atcaacaaggcctgtgatgagtcagtgctgatggatctcaaagccctgctgctggaggcc
aagcagaaggttccacccgtcctgcaagtcctgcactgtggggacgagtccatgctggag
atcggaggagagcgtggctgtgccttctgtgggggcttgggccaccggatcaccgactgc
cccaagcttgaagccatgcagacgaagcaggttagcaacatcggccgcaaggactacctg
gcccacagctccatggacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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