KEGG T05912: 102412681

Bubalus bubalis (water buffalo): 102412681

Entry

102412681         CDS       T05912

Symbol

PDE12

Name

(RefSeq) 2',5'-phosphodiesterase 12

K19612

2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]

Organism

bbub Bubalus bubalis (water buffalo)

Brite

KEGG Orthology (KO) [BR:bbub00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbub03019]
    102412681 (PDE12)
   03029 Mitochondrial biogenesis [BR:bbub03029]
    102412681 (PDE12)
Enzymes [BR:bbub01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     102412681 (PDE12)
Messenger RNA biogenesis [BR:bbub03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102412681 (PDE12)
Mitochondrial biogenesis [BR:bbub03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    102412681 (PDE12)

SSDB

Motif

Pfam:

PDE12-like_N Exo_endo_phos DUF4739

Other DBs

NCBI-GeneID:

102412681

NCBI-ProteinID:

XP_006054790

EnsemblRapid:

ENSBBUG00015025557

Position

21:complement(43496713..43501808)

AA seq 609 aa
MWRLPGVRAALRGVRTAVERRSRTEAASETSVGAMERAVVRCVPSEPKLSLSFALADGSH
KNMQRDQSEPLGRALSRIATNALKGHAKVAAAKKSRKNRPNAGSGMACAGPGPEPAAACE
PVVKLYYREEAVAEDVLNVDAWQDGAVLQIGDVKYKVERNPPTFTELQLPRYIMAGFPVC
PKLSVEFGDPTGSLFRWYKETKPRAAESEGGGPSSSSPSSPSPGWTETGVEERVYTPSNA
DIGLRLKLHCTPGNGQRFGPSRELESVCPVEAGPGTCTFDHRHLYTKKVTDDALIRTVSY
NILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRCVFTDS
LVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDIAFHEALQSDPLHKELLEKLAL
YPSAQERVLQRSSVVQVSVLQSTKDSSKKICVANTHLYWHPKGGYIRLIQMAVALAHIRH
VSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIAEDHEDWTSNGEEERCNMSLSHFFKL
KSACGEPAYTNYVGGFHGCLDYIFIDLHALEVEQVIPLPSHEEVTTHQALPSVSHPSDHI
ALVCDLKWK

NT seq 1830 nt +upstreamnt +downstreamnt
atgtggaggctcccaggcgtccgcgccgcgcttcgtggggtccgcacggcggtggagcgg
cgcagtcggaccgaggcggcgtctgaaacctcggtgggcgcgatggagcgcgctgtggtg
cgctgtgtgccttccgagcctaagctaagcctgtcattcgcgctggccgacggcagccac
aagaacatgcagcgcgaccagagcgagccgctgggtcgggctctcagccggatcgctacc
aacgcccttaaaggccacgctaaagtagctgccgccaagaagagcaggaagaacaggcca
aacgcaggcagtggcatggcctgtgctgggcctgggcctgagccggctgcagcctgcgag
cccgtggtgaagctgtactaccgggaggaggcagtagctgaagacgtgctcaatgtggac
gcctggcaggacggtgcggtgctgcagattggtgatgtcaagtacaaggtggagcgtaac
ccacccaccttcaccgagctacagttgccgcgctacatcatggccggcttcccggtatgc
cccaagcttagcgtcgaatttggggatcccaccggctccctctttcgctggtacaaggaa
accaaacccagagcggcggagtctgagggcggagggccctcgtcatcgtctccctcttcg
ccctctcctggttggaccgagacgggtgtagaggagcgcgtctacaccccgtctaatgcc
gacatcgggctacggctcaaacttcattgcactccgggtaatgggcagcgcttcgggcca
agccgggagttggaaagtgtgtgtccagtggaggctgggcccggcacctgcacctttgac
caccggcatctctacacaaagaaggtgacggacgacgctctcatccgcacagtctcctac
aacattctggctgacacatacgcccagactgagttctcgcggacggtcctgtacccatac
tgtgccccttacgctctggaactcgactaccgccaaaaccttatccaaaaggagctcacg
ggctacaacgctgacctcatctgtttgcaggaagttgaccgctgcgtgtttacagacagc
ttggtgccggccctcgaggcctttgggctggagggcgtgtttcgaatcaagcagcatgaa
ggcctggccactttctaccgaaagtccaagttcagcctccttagccagcatgacattgct
ttccatgaagccctgcagtccgacccacttcacaaagaactgctggagaaactagctttg
tatccatcagcgcaagaaagggtgctccagaggtcttctgtcgttcaggtttctgttctt
cagtctacaaaggactcttctaaaaagatatgtgttgctaatacccatctctactggcac
cccaaaggtgggtacattcgtctcattcaaatggcagtagccttggctcacattagacat
gtctcttgtgatctgtatcccggcataccagttatattttgtggggactttaatagtacc
ccatccacaggaatgtatcactttgtcatcaatggcagcattgcagaggatcatgaagac
tggacttccaatggggaagaggaacgatgcaacatgtctcttagccatttcttcaaactg
aaaagtgcttgtggtgaacctgcttacacaaattacgttggtggctttcatggatgtctg
gattatattttcattgacttacatgctttagaggttgaacaagtgattccattacctagt
catgaagaagttaccacccaccaagccttacctagtgtttcccatccctctgaccacata
gcacttgtatgtgatttaaaatggaaatag

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