KEGG   Bubalus bubalis (water buffalo): 102412996
Entry
102412996         CDS       T05912                                 
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102412996 (POP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bbub03009]
    102412996 (POP1)
   03016 Transfer RNA biogenesis [BR:bbub03016]
    102412996 (POP1)
   03029 Mitochondrial biogenesis [BR:bbub03029]
    102412996 (POP1)
Enzymes [BR:bbub01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     102412996 (POP1)
Ribosome biogenesis [BR:bbub03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     102412996 (POP1)
Transfer RNA biogenesis [BR:bbub03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    102412996 (POP1)
Mitochondrial biogenesis [BR:bbub03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    102412996 (POP1)
SSDB
Motif
Pfam: POP1_N POPLD
Other DBs
NCBI-GeneID: 102412996
NCBI-ProteinID: XP_006048834
EnsemblRapid: ENSBBUG00015009702
Position
15:16159771..16195131
AA seq 1015 aa
MSNAKERKHAKKMRNQPTNVTLSSGFVADSGVKHHNGGGKPFQSQKESHPGTSRQRQTRT
THRPLAESDAKEQPSSRVTFRKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLKA
VTQTSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLREIAQKEAEKAVHQKKEHSKNKCHKA
RRCHINRILEFNRRQKKNKWLETHIWHAKRFHMVKRWGYCLGERPTVKSHRACYRAMTSR
CLLQDLSYYCCLELEGKEEEILKALSSMCSIDTGLTFAAVHCLSGKCQGSVMLYRANKYP
LEMLGPVTFMWKAQGTPGDTSESRQLWIWLHPALKQDILEEIKAVCQCMEPTKATVRIPD
PLLTPSQEKSQTDLPEEKVGKKRKRKDDGESTQPVKKVIGDGTRDPLQPYSWLSPATGIV
IRDLTMEMNRFRLIGPLSHCILTEALKAASVHTDGEDTEKTPHRWWIETCKNPDSVSLHR
RQEAVFELLGGITSPAEIPAGTILGLTVGDPRINLPQKRSKVLPNPEKCQDNEKVRQLLL
EGVPVDCSHSFLWNQDICKSVTENKISDQDLNRKRSELLVPGSQLFLGPHESKVPILLIQ
QPGKVTGDDQRGWGSGWDVLLPKSWGMAFWIPFIYRGARVGGLKETLVHSQYKRSPNVPD
DFPDCPAGVLFAEEQAKHLLEKYKRRPPAKRPNYVKLGTLAPFYCPWEQLTRDWESRVQA
PEESSAASSPSGEESGSSRDGVPCVAEPGRTAQLSDDQGTPLRDSTGPEGVMDTDCPAGM
GTEEAASQSAASSPLCVLRSRRLLRQLSAWCGPRPGGRQATQRAGRGQQGLTGEACPAVL
DAFPRALVWVRLALLGKGSPGPHTLICVPAEEDLLQLGRDRLYHGPQEPKHSDPFKSQIR
EQKEKKKLVKRLNQGRAASEGLAEGGPAAGPQPLTPGLWSGPLPVVTSHCSRVLLGFVTQ
GDFSMAVGCGEALGFVSLTGLLDMLSKQPGLDRGLVLLRPPASLQYRFARITIEV
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgtctaatgcaaaagaaagaaaacatgcaaagaaaatgagaaaccagcccaccaatgtg
actttatcctctggctttgtggctgacagtggagtaaagcaccataatggaggtggaaaa
cctttccagtctcaaaaagagtctcatcctggaacttcccgacagcggcagaccagaacg
acccaccgtccgctggccgagtctgatgcaaaggagcagccttcctccagggtaaccttt
agaaaaaagggaggatggaaagcaggtcccgagggcacttctcaggagattcccaagtat
ataactgcttctacttttgctcaagcccgagctgctgaaatcagtgccatgttgaaagca
gtgacccagacatcttctaattcgctggttttccagactctgccacggcacatgagacga
agagccatgagccacaatgtcaaacgccttcctcggcggttacgggagattgcccagaaa
gaggcagagaaagcagttcatcagaaaaaagaacactcaaaaaataagtgccataaagct
cgacgatgtcacataaaccgcatactggaatttaaccggagacaaaagaagaacaaatgg
ctggaaactcacatctggcatgcgaagcggtttcacatggtcaagagatggggctactgc
ctgggggagaggccgacagtcaagagccacagagcctgctaccgggccatgacgagccgc
tgcctcctccaggatttatcctactactgctgtttggagttggagggcaaagaggaagaa
atactaaaagcactttcttcaatgtgtagcatagacacaggattgacttttgctgcagtc
cactgtttgtctggaaagtgccaagggagtgtcatgctttaccgggcaaataagtatccc
ctagaaatgctgggtcctgtgacatttatgtggaaggcccaggggacccctggtgatact
tcggagagcaggcagctgtggatctggcttcatccagctcttaaacaggatatcttagag
gagataaaagcagtgtgccagtgtatggaacctaccaaggccactgtccggatcccagat
ccccttctgacaccgtctcaagagaaaagccagactgacctgcctgaagaaaaagtcggc
aagaaaagaaaacggaaagatgatggggaaagcactcaaccagttaaaaaagtcattggt
gatggaactagagatccactgcaaccatattcttggctctctccagccacaggcatcgtg
atccgtgatttgactatggagatgaacagattccgcctgatcggtcctctttctcactgc
atcttaactgaggcgctcaaagccgcttccgtccacaccgacggagaggacacagagaag
acacctcaccgttggtggattgaaacctgcaagaatcctgatagtgtttcccttcatcgc
agacaagaagccgtttttgaattgttgggagggataacatcaccagcagaaattccagca
ggtactatcctgggactgacggttggtgacccacgaataaatctgcctcaaaagaggtcc
aaagttttgcccaatccagaaaaatgccaagataatgagaaagttagacagctgcttctg
gagggtgtgccggtggactgttcacatagctttctctggaaccaagatatctgtaagagt
gtcacagagaataaaatctcggatcaggatttaaaccggaagaggagtgaattgctggtg
cccgggtcacaactttttttaggtccccatgaatccaaggttcctatacttttgattcaa
caaccaggaaaagtgacgggtgatgaccaacgaggctggggaagcggctgggatgtcctg
cttccaaagagctggggcatggccttctggattccatttatctatcgaggtgcaagagtc
ggagggttaaaagaaaccttagtgcattctcagtataaaaggtcgcctaatgtcccagac
gatttcccagactgccctgctggggttctctttgctgaagagcaagcgaaacatcttctt
gagaagtacaagagacgtcctcctgcaaaacggcccaactacgttaagcttggcaccctg
gcacctttttactgtccctgggagcagttaactcgagactgggagtcaagagtccaggct
ccagaggaatcgtctgcagcttcctctccaagtggtgaggagagtggctcgagcagagat
ggggtgccttgtgttgccgagcctgggaggactgctcagctgtctgacgaccagggcaca
cccctgcgtgactccactgggcccgagggagtcatggacacagattgtccagctgggatg
gggaccgaggaggcggccagccagagtgccgccagcagccccctttgcgttctgaggagt
agaagattactgaggcagctgtcagcctggtgcgggcccaggcctgggggccgtcaggcg
acccagcgagccggcagagggcagcaaggactaaccggagaggcctgcccggccgtgctg
gacgccttccccagggccctggtgtgggtcaggctggccctgctggggaagggcagccct
ggccctcataccctgatctgcgtcccggccgaggaggatctcctgcagctcggccgcgat
cggctgtaccatgggccccaggagcccaagcacagcgacccattcaagagccagatccgg
gaacagaaggagaagaaaaagctagtgaagaggctgaaccaagggcgtgccgcatctgag
ggcctggcagagggcggccctgcagccgggccccagcccctgaccccgggcttgtggtca
ggccccctccccgttgtgacttctcactgctccagagttctccttggctttgtcacacag
ggagatttttccatggccgttggctgtggggaagccctggggtttgttagcctgacgggc
ttgctggacatgctgtccaagcagccagggctggacaggggcctcgtgttgctgaggccg
cctgcctccctgcagtatcggtttgcaagaatcacgattgaggtgtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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