KEGG T01844: HMPREF9228

Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0706

Entry

HMPREF9228_0706   CDS       T01844

Name

(GenBank) DNA gyrase, B subunit, C-terminal domain protein

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bbv Bifidobacterium breve ACS-071-V-Sch8b

Brite

KEGG Orthology (KO) [BR:bbv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbv03032]
    HMPREF9228_0706
   03400 DNA repair and recombination proteins [BR:bbv03400]
    HMPREF9228_0706
Enzymes [BR:bbv01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HMPREF9228_0706
DNA replication proteins [BR:bbv03032]
Prokaryotic type
  DNA Topoisomerases
   HMPREF9228_0706
DNA repair and recombination proteins [BR:bbv03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HMPREF9228_0706

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AEF26781

Position

837771..840122

AA seq 783 aa
MPKEEYGAKDLSVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGFCNNIV
VTLHTDGSVEVADNGRGIPVDKEPKTGLSGVEVVLTKLHAGAKFGNSSYNAVGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYADADPVNPSPDSPFKRTRKNKPTELEI
IGKVSPKTTGTRIRYWYDPEIFNKTAEFSYEQLIDRVRQTSFLVPGLKITIVDENVPEAN
GADTVGTEPNEDVAVVAESLNANETTNATESFSGEDSPLDGFAELSDDASIDGDTEAPDE
EDFSLSSATEVVDGAFGEQPAHPRTVEFLHTGGVKDFVDFLSKGEPISDIWRIQGEGTYK
EETQAVGEGGELHAQEIERTCGVDIALRWVNGYDTTIMSFVNIVETPGGGMHVDGFMNAI
TKQIRKAVEDNARKLKVNLKDSAMKVERDDIQAGLVAVVTARVAEPQFQGQTKDVLGTAQ
VKPIVTRLTDKQFGEMITGSKRGYKEQSARVLEKIVGEMHARIQSRKAKEVTRRKNALES
ASMPAKLSDCQPGNDDVAELFIVEGDSALGTAKAARNAGFQALLPIRGKILNVQKASITQ
MLSNKECAAIIQVVGAGSGQSFDIEQSRYHKIIMMTDADVDGAHIRILLLTLFYRYMRPL
IEHGYVYAAVPPLHRIALTGSHKGEYIYTYSDDELAGKLADLDKKRIGYNDDIQRYKGLG
EMDADQLADTTMDPRTRMLRRIRMEDAAQASEIFNLLMGDEVPPRKQFIVDNADDFDRSK
IDT

NT seq 2352 nt +upstreamnt +downstreamnt
atgcccaaagaagaatacggcgctaaggatttatccgtccttgagggtctggacgcggta
cgcaagcgtccgggtatgtacatcggtaccacggactcgcagggtcttatgcactgcctg
tgggagatcatcgacaactccgtcgatgaggcgttggccggtttttgcaacaacattgtc
gttactctgcacactgatggatcggtggaagtcgcggacaacggccgaggcattccggtc
gataaggaaccgaaaaccgggctatccggcgtggaagttgtcctgaccaagctgcacgcg
ggcgccaagttcggcaattcgtcctataacgcggtcggtggcctgcacggtgtgggctct
tctgtggtcaacgcattgagttcccgtcttgatgtggaagtcgatcgtgacggcaaaacc
catcacatggccttccatcaagggcatcccggcgtatacgcagacgctgatccagtcaac
ccatctccggactcgccgttcaaacgtacccgtaagaacaagcccaccgagctggaaatc
atcggcaaggtttcgcccaagaccaccggaacccgcattcgttactggtacgatccggaa
atattcaataaaactgctgaattctcatatgagcagctcatcgaccgtgtgcgtcagacc
agtttcctagtgcccggtcttaaaatcaccatcgtcgatgagaacgtgccggaagccaac
ggggccgatacggtcggcactgagcccaacgaagatgtcgcagtcgtagccgaatcactg
aatgcgaacgaaacgactaacgcaaccgagtcattctccggcgaagactccccacttgac
ggattcgccgagctttcggacgatgcgtctattgacggcgataccgaggctccggacgag
gaggatttctcgctgtcatccgccactgaagtggttgatggcgcttttggtgaacagcct
gcccatccgcgtacggtcgaattcctgcacaccggtggcgtcaaggatttcgtggacttc
ctgtccaaaggcgagcccatctccgatatctggcgcattcagggtgagggcacctacaag
gaagagacccaggccgtgggcgagggcggcgaactgcatgcccaggagatcgaacgcact
tgcggcgtagacatcgccctgcgttgggtgaatggttacgacaccacgatcatgagtttc
gtgaacatcgtggagacgcctggcggcggtatgcacgtggacggcttcatgaatgctatc
accaagcagattcgcaaggccgtggaagacaacgcccgcaagctcaaggtgaacctcaag
gactccgccatgaaggtggagcgtgacgacatccaggccgggctcgtggccgtggtcacc
gcacgtgtggcagaaccgcagttccaggggcagaccaaggatgtgcttggtaccgcgcag
gtcaagccgatcgtcaccaggctcaccgacaagcagttcggcgagatgatcaccggttcc
aagcgcggctacaaggagcagtccgcccgcgtgctggagaagatcgtcggcgagatgcac
gcgcgtatccagtcgcgcaaggccaaagaggtcacgcgccgcaagaacgcgctcgaatcc
gcttccatgccggccaagctgtccgactgccagccgggcaacgacgacgtggccgaactg
ttcatcgtcgaaggtgattccgcactcggtaccgccaaggccgcccgcaacgccggcttc
caggcgctgctgccgattcgaggcaagatcttgaacgtgcagaaggcctcgatcacacag
atgctgtccaataaggaatgtgcggccatcatccaggtggtgggcgctggttcgggccaa
agcttcgacatcgaacagtcgcgttatcacaagatcatcatgatgactgatgctgatgtg
gatggcgcgcacattcgtattctgctgctgacgttgttttaccggtatatgcgcccgctt
atcgaacatggttacgtgtatgcggccgtgcctccgctgcaccgtatcgcgctgaccggc
tcgcataagggcgaatacatctacacgtattccgatgacgaattggccggcaaactggcc
gacctcgataagaagcgcatcggctacaacgatgatattcagcggtacaagggtctcggc
gaaatggatgccgatcagctggcagacaccaccatggatccgcgcacgcgcatgctgcgc
cgcattcgcatggaagacgccgcccaggcttccgagatcttcaatctgttgatgggtgat
gaagtgccgcctcgcaaacagttcatcgtggataacgccgatgacttcgaccgttccaag
atcgatacctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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