KEGG   Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0843
Entry
HMPREF9228_0843   CDS       T01844                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bbv  Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HMPREF9228_0843 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbv03400]
    HMPREF9228_0843 (ruvB)
Enzymes [BR:bbv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMPREF9228_0843 (ruvB)
DNA repair and recombination proteins [BR:bbv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HMPREF9228_0843 (ruvB)
    RecFOR pathway proteins
     HMPREF9228_0843 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 AAA_14 AAA_22 Mg_chelatase nSTAND3 AAA_3 RNA_helicase NTPase_1 Sigma54_activ_2 Zeta_toxin AAA_18 TsaE AAA_25 NB-ARC IstB_IS21 AAA_33 AAA_19 AAA_17 POTRA_2 Rad17 NACHT AAA_24
Other DBs
NCBI-ProteinID: AEF27484
Position
complement(980738..981802)
AA seq 354 aa
MGKDMNYGTSNTGANEESLRMVSSQPIGNEPVSDEELRPHVLEGFIGQPRLKAQLQLFLD
AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDT
GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
LPSPLRARFGFTAHLDFYPHEELEKLIERSASVLGVNLDEGSAHELALRSRGTPRIANRL
LRRVRDWAIVHDLIVVHPADVKEALALYQIDSEGLDRLDIAVLNAIVRNFNGGPVGLNNL
AAMVGEESETVETVCEPYLVREGFMVRTPKGRVATEKAWQHLGITPKDDVSKLF
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgggcaaggacatgaactacggcacatccaacactggagccaatgaagaatcattgcgc
atggtgtcttcacaaccgataggcaacgagccggtcagtgatgaagagctccgcccgcat
gtgcttgaggggttcatcgggcagccccggctcaaggcccagctccagctgtttctcgac
gcagcccgcaaacgtgacgtgccgccggatcacatactgcttgccggccctccaggcctc
ggtaagaccacattggccatgattgtggccaatgaacttgaagtcccgattcgcgtgacc
tccggccctgctgtgcagcacgccggcgacctggcttcgatcttgagttcgctggatacc
ggcgaagtgctgttcatcgatgagatccaccgtctgccgcgcgcagccgaagagctgctg
tatatcgcgatggaggattttcgcgtggatgtgatggtgggcaaaggaccgggcgccagc
tcgattccactgactctgcctcgcttcaccgtcattggcgccaccacccgcgaaggtatg
ttgcccagcccgttgcgtgcgcgcttcggcttcaccgcacatcttgacttctatccgcat
gaggagttggagaagcttatcgaacgctcggcaagcgtgctgggggtcaaccttgatgag
ggttccgcccatgaactcgcattgcgttcccgcggcacgccgcgtatcgccaaccgtctg
ctgcgccgcgtgagggattgggccattgtgcatgaccttatcgtcgtgcacccagctgat
gtcaaagaggccttggcgctgtaccagattgattccgaaggccttgaccggctggatatc
gccgtgctgaacgccattgttcgcaatttcaacggtggtcccgtcggcttgaacaacctc
gcggccatggtgggcgaggaatcggaaaccgtggaaaccgtctgtgagccgtatctggtg
cgcgagggattcatggtgcgcacgcctaaaggccgcgtggccaccgagaaggcatggcag
catctgggcattacgcccaaggatgatgtcagcaagctcttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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