KEGG   Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1644
Entry
HMPREF9228_1644   CDS       T01844                                 
Symbol
serS
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
bbv  Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bbv00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF9228_1644 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bbv01007]
    HMPREF9228_1644 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbv03016]
    HMPREF9228_1644 (serS)
Enzymes [BR:bbv01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     HMPREF9228_1644 (serS)
Amino acid related enzymes [BR:bbv01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   HMPREF9228_1644 (serS)
Transfer RNA biogenesis [BR:bbv03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HMPREF9228_1644 (serS)
 Prokaryotic type
    HMPREF9228_1644 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N
Other DBs
NCBI-ProteinID: AEF26427
Position
complement(1884631..1885917)
AA seq 428 aa
MLDIQFIREHTDIVKESQRKRGESVELVDEVLSSDTVRRESLKAFEEARAQQKEIGKKVA
SAPADEKAKLIAETKELSQKVAEFKSKADAAAEEYTTAMWKLSNIVEPEAPEGGEDDYVV
VKKVGQIRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGQVARMQIAMLTM
AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQYLVGTSEVALAGMH
ENEILDLGNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKQEDSYKEHE
HLLAMEQEMLAKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQNRYRELTSTSNCTEYQ
ARRLNIRERMEDGGTRPVSTLNGTLATTRWLVAIMENHQQKDGSIEIPKAMRAYMGGKEV
IEPTKWEA
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgcttgatattcaattcattcgtgaacacaccgatatcgtcaaggaatcccagcgcaag
cgtggcgagtccgtggaactcgtcgacgaagtgctttcctccgacactgtccgtcgtgag
tcgctcaaggcttttgaagaggcccgcgcccagcagaaggaaatcggcaagaaggtcgcc
tctgccccggctgacgaaaaggccaagcttatcgccgaaaccaaggaactctcccagaag
gtcgccgagttcaagtccaaggccgatgcagctgctgaggaatacaccaccgccatgtgg
aagctctccaacattgtggagccggaagctcctgagggcggcgaggacgattacgtggtc
gtcaagaaggtcggccagattcgtgacttcgcggctgaaggtttcgagcccaaggatcac
ctgaccctcggcaccggcgtggctggcatcgacatgcgccgcggtgtcaaggtgggcggc
tcccgcttctacttcctgcgtggccaggtggcccgcatgcagattgccatgctcactatg
gccgttgaccaggctgaggagcacggcttcacgctggccattaccccgacgctcgtgcgc
cccgaagtcatgcgcggcactggcttcctgaactcccacgccgacgagatctaccgcctg
cgtgagcccgatgaccagtacctggtcggcacttccgaagtggcgctcgccggcatgcac
gagaacgagattctcgacctcggcaatggaccgctgcgttactgcggttggtcctcctgc
taccgccgcgaggccggcgccgcaggcaaggacacctccggtatcatccgcgtccaccag
ttcgacaaggtggagatgttcgtctacgccaagcaggaggactcctacaaggagcatgag
cacctgctggctatggaacaggagatgctcgccaaggtcgaggtgccataccgcatcatc
gacaccgccgccggcgatctcggctcctccgccgcccgcaagttcgactgcgaggcttgg
gtgccgacccagaaccgttaccgtgagctcacttccacctcgaactgcaccgagtaccag
gctcgtcgtctgaacatccgcgagcgtatggaagacggcggcactcgcccggtctccacg
ctcaacggcacgctggccaccacccgttggctggttgccatcatggagaaccatcagcag
aaggatggctccatcgagattccgaaggccatgcgtgcctacatgggcggcaaggaagtc
atcgagccgactaaatgggaggcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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