KEGG   Bdellovibrio bacteriovorus W: BDW_02740
Entry
BDW_02740         CDS       T03036                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bbw  Bdellovibrio bacteriovorus W
Pathway
bbw03030  DNA replication
bbw03410  Base excision repair
bbw03420  Nucleotide excision repair
bbw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BDW_02740
   03410 Base excision repair
    BDW_02740
   03420 Nucleotide excision repair
    BDW_02740
   03440 Homologous recombination
    BDW_02740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbw03032]
    BDW_02740
   03400 DNA repair and recombination proteins [BR:bbw03400]
    BDW_02740
Enzymes [BR:bbw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BDW_02740
DNA replication proteins [BR:bbw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BDW_02740
DNA repair and recombination proteins [BR:bbw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BDW_02740
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BDW_02740
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AHI05056
Position
558364..560934
AA seq 856 aa
MKKIYLIDVSAMFFRAFYAIRTLTSPSGLPVNAIYGFLSMLIKLKKEDNPEYIVFCYDRK
EPSFRKEVYDAYKAHRTEMPEDLGVQIPYIKKLAEFMGIPAYEAEGYEADDIIGTLARWG
KKENYEVFIVSGDKDFGQIVEDGIWLYDTMKDIRYDSAAVEKKWGVPPHQFIDYLSIVGD
ASDNVPGVKGVGEKGAVKLLQQFPTLEAIYENIEQVESKSVREKLIASKDNAFLSKKLVT
ICTDIPLDVSAEAIHLKPMMEQELRGLLAELNFKSFEKSIFGSASDLNEVPAKTSSPSQS
SSQESSSQEITPVINILKENRVFQEKTMLTRELAEVLEENQSLWGVLHNDLCFLATEKDV
IQVSDYEYLGKLSDTFKVRWSGFDLKNFWHKIGAKSPLPQWDSQLASYVLKAGDTSDFNK
VYAKAMLEEISAEITPSDLINAHINFAANMQAQLKAVDNEKVYQELELPLAPVLLSMEKL
GVKIDKPLLENFSEELAREIAELEKAIHKESGEEFNIGSPKQLGVILFEKLGLPAGKKTK
TGYSTGEEVLLTLDHSIAKLVLSWRELSKLKSTYVDSLPALTDKDDRIHTSFNQAMTTTG
RLSSTHPNLQNIPIKTPRGKMVRRAFIAAPNMKLLSVDYSQIELRILAHISEDPNLIKAF
QEDLDIHAATAAEIYNVSLKDVTEDLRRSAKAVNFGIAYGQGAFGLAENLGISRGEAKDI
IDRYFARFKNVRDYIEGTVKVAHEQGYVETLFGRRRYIEELKSKNMMLKKFGERAAINAP
IQGTASDLVKKAMIEVHEKVPTRMLLQVHDELVFEDREENLQRFVPELVRIMESVATLKV
PLKVNYSIGNNWDEAH
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgaaaaaaatctatctaatcgatgtgagcgcgatgttctttcgtgctttctacgcgatc
cgcactctcacatctccttctggtttaccagtcaatgcgatctacggctttttgtcgatg
ttgatcaaacttaaaaaagaagacaatcctgaatacatcgtcttttgttatgaccgtaaa
gagccatccttcagaaaagaagtttatgacgcttataaagctcatcgcacggagatgcct
gaagatctcggtgtgcaaattccctatattaaaaaactagctgaatttatgggaattcct
gcctatgaagctgaaggctatgaggccgatgacatcattggaactttggctcgttggggg
aagaaagaaaattacgaagtttttatcgtcagtggtgataaagactttgggcaaatcgtt
gaggatggaatttggctctacgatacgatgaaggatattcgctacgactctgctgctgta
gagaagaagtggggcgttcctccgcatcaattcatcgactatctttctattgtaggtgat
gcctcagacaacgtgcctggtgtgaagggggttggggaaaagggcgctgttaaactattg
cagcaattcccgactcttgaagctatttacgaaaatatcgagcaagttgaaagtaagagc
gtgcgtgagaagttgattgcttctaaggacaacgcctttttatctaaaaaacttgtcact
atctgtacggatattcctcttgatgtgagtgccgaggccattcacttgaaaccgatgatg
gaacaagaactgcgtggcttgctcgcagagttgaatttcaaatcgtttgagaaaagtatc
tttggttcagcttcggatctaaatgaagtgcccgcgaagacctcttcgccatcgcagagt
tcttcgcaagaaagctcttctcaagaaattactcccgtcattaacatcttaaaagaaaat
cgtgttttccaagaaaagacgatgctcactcgagaacttgctgaagttctagaagagaat
caatctctctggggtgttttgcataatgatctttgttttttagcgaccgaaaaagacgtt
attcaggtctctgattatgaatatctcggcaagctttcggacacttttaaagtacgctgg
agtggttttgatcttaagaatttttggcataagattggcgcgaaaagcccgctaccgcag
tgggactctcaactggcgtcttatgttttaaaggctggcgatacgtcggattttaataaa
gtctatgcgaaggccatgctggaagagatctctgctgaaatcactccgtcagatcttatc
aatgcccacattaacttcgcggccaatatgcaggcccagttaaaagctgtggataatgaa
aaagtttatcaagagctggagctgcctttggcgccggttctgctttctatggaaaagctg
ggtgtgaaaattgataagccacttttagaaaacttcagcgaagagctagctcgtgaaatc
gctgagcttgaaaaggctatccataaagaatcgggtgaagagtttaatatcggaagccct
aagcaattaggtgtgattctttttgaaaaattgggtttgccagcaggtaaaaaaactaaa
acgggatactctaccggagaagaagtattactgactctcgatcattccatcgcaaagcta
gttctgagctggcgtgagctgtctaaattgaaatctacctatgtggattcattgccggca
ttgacggataaagacgatcgcatccatacaagctttaatcaggcgatgacgaccacaggt
aggctatcgagtacgcatcctaacttacaaaacattcctattaaaacgccacgtggaaag
atggtgcgtagagcatttattgcagctccgaatatgaagcttctttctgtggattactct
cagattgagcttagaattcttgcgcatatttctgaggatccaaatcttatcaaggcgttc
caagaggatctagatattcacgcggctactgctgcagagatctacaacgtgtctttaaaa
gatgtgacagaagatcttcgtcgctcagctaaagccgtgaactttggaatcgcctacggt
cagggagcttttggacttgcagagaatctagggatttctcgtggagaggccaaagatatt
attgatcgctactttgcaagattcaaaaatgttcgcgattatatcgaaggcaccgtaaag
gtggcacatgaacaaggatacgtcgaaacactttttggtcgtcgtcgttatatcgaagag
ctaaaatcaaaaaacatgatgctcaaaaaatttggagaaagagctgccatcaatgctccc
atccaaggaacggccagtgatctagttaagaaggcgatgatcgaagttcacgaaaaagtt
ccgacaagaatgttactacaagtacatgacgaattggtttttgaagatcgcgaagaaaat
ctacaaagatttgttcccgagcttgtaagaatcatggagtccgtagccacattgaaagtc
ccactgaaagtgaactactccatcggcaacaactgggacgaagcccactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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