KEGG   Bdellovibrio bacteriovorus W: BDW_04795
Entry
BDW_04795         CDS       T03036                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
bbw  Bdellovibrio bacteriovorus W
Pathway
bbw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDW_04795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbw03019]
    BDW_04795
   03009 Ribosome biogenesis [BR:bbw03009]
    BDW_04795
Enzymes [BR:bbw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BDW_04795
Messenger RNA biogenesis [BR:bbw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BDW_04795
Ribosome biogenesis [BR:bbw03009]
 Prokaryotic type
  rRNA helicases
   BDW_04795
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: AHI05467
Position
complement(998345..1000192)
AA seq 615 aa
MAPLTTVDSFESFGLSAPLLAAMQDMGFSTPTPIQRQALPLLLTGAQDFIGLASTGTGKT
AAFGIPLIENIDPTIKDTQALVMSPTRELALQVAEQLTLLGKKKGVRVVTIYGGSSYRTQ
IDGIKRGAHIVVATPGRLVDFIEQRIIKLQNVKTVVLDEADEMLSMGFKEDMETILRATQ
PDEETDSQRAACRTWLFSATMSPEVKRLSSTYLENPETVQVNKVGAADTIEQVYYTVKNS
SKTEVIGRLLQTLPEFYGIIFCQTKMEVAELADILTQRGFPADSLHGDKNQQEREATMKK
FKSRSVKIVVATDVAARGLDIKDLTHVINHSLPWDVESYVHRIGRTGRNGQKGVAITLVN
PEQLNLLRRVMITAKATLTKGVVPSANEVAGLKIKDVLDKVTTMDASSAPVQSAMDLIMD
LTHAEEIDFKELTKEELLARFIVAYFPNVFVKKDMILDYMGDKVPRELLPRDPQDNRFSR
GRSEGRGGSRGDRGPRDFNGGGRRERSDRGGRGFGRSSDRPEGGGYKARTSSDRPEGGGY
KARSTSSDRPEGGGYKARSFDRPERSERADRPERSERPERSERSERSSRPPLRSEERRDH
SGIKRVRSPKRHFRD
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggctccattaacaactgtcgattcgttcgaaagctttggtctgagcgcgcccctattg
gccgctatgcaggacatgggcttctcgacgcccacgcctattcaacgccaagctttacct
cttcttcttacaggagcccaagactttatcggtcttgcttcgacaggaacgggaaagaca
gcagcgtttggtattcctcttatcgaaaacattgatccgacgatcaaggacactcaggct
ctagttatgagcccgactcgtgaacttgctcttcaagtagcagaacaactgactcttctt
gggaagaaaaaaggtgttcgcgttgtcactatttacggtggttctagctaccgcacacaa
attgacggcattaaaagaggcgctcacattgttgtagcaactccgggtcgtcttgtagac
ttcatcgaacaaagaatcatcaagcttcaaaatgttaaaacagtggttttagacgaggca
gatgaaatgctttctatgggctttaaagaagacatggaaacaattcttcgcgccactcaa
ccagatgaagaaactgactctcaaagagcggcctgcagaacatggttattctctgcaaca
atgagccctgaggtaaaacgtctttcttcgacttacctggaaaatccagaaactgtacaa
gttaataaagtaggcgctgctgatactatcgagcaagtttactacacagttaaaaactct
tctaaaacagaagtcattggccgccttcttcaaactcttcctgagttctacggtatcatc
ttctgtcaaacgaagatggaagtggctgaacttgcagatattttaactcaaagaggcttc
ccggctgactctcttcatggagataaaaatcagcaagagcgtgaagctacaatgaaaaaa
ttcaaatctcgttctgtgaagattgtagtagcgacggacgttgctgctcgtggtttggat
attaaagatcttactcacgtgatcaatcactctctaccatgggatgttgagtcctatgtt
caccgtatcggccgtacgggtcgtaacgggcaaaaaggtgttgccatcactttggtaaat
ccggagcaattgaatcttcttcgccgcgtgatgatcactgcgaaagcaacccttactaaa
ggtgttgttccatctgcgaatgaagtggctggtctaaaaattaaagacgttttagataaa
gtgacaacaatggatgcttcttcagctccggttcaatctgcaatggatttgatcatggat
ttaactcacgctgaagagatcgactttaaagagcttactaaagaagaacttctagctcgc
tttatcgtggcttacttcccgaatgtcttcgttaagaaagacatgatcttagattacatg
ggtgacaaagttcctcgcgagcttcttccacgtgatcctcaagacaatcgtttctcaaga
ggtcgctctgaaggtcgcggtggcagcagaggcgatagaggtccaagagacttcaacggc
ggtggacgccgtgagagaagtgatcgcggtggccgtggttttggtcgctcatctgatcgc
cctgaaggcggaggctataaagctcgcacttcttctgaccgccctgaggggggtggatat
aaagctcgtagcacttcttccgaccgccctgaaggtggtggatataaagcgcgcagcttt
gatcgtccagaacgcagtgaaagagcggatcgcccagaacgttcagagagacctgagcgc
tcagagcgtagcgagagaagctcaagaccacctcttcgttctgaagaacgtcgtgatcac
agcggaattaaacgtgtgcgcagccctaaaaggcatttccgcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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