KEGG   Bdellovibrio bacteriovorus W: BDW_12250
Entry
BDW_12250         CDS       T03036                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bbw  Bdellovibrio bacteriovorus W
Pathway
bbw03420  Nucleotide excision repair
bbw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BDW_12250
   03430 Mismatch repair
    BDW_12250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbw03400]
    BDW_12250
Enzymes [BR:bbw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BDW_12250
DNA repair and recombination proteins [BR:bbw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BDW_12250
   MMR (mismatch excision repair)
    Other MMR factors
     BDW_12250
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor Viral_helicase1 AAA_14 ResIII
Other DBs
NCBI-ProteinID: AHI06950
Position
2584288..2586573
AA seq 761 aa
MDILEFVTKNLNPAQKEAVETTQGPLLILAGAGSGKTRVLTHRMANIIGQGIASPDEILC
VTFTNKAAKEMEHRIYKVLSDMGVMVHSPLWINTFHSFCVRILRQHITLLDYKPFFGIYD
ASDSLSQIKKVMTALNINDKMYPAKNFQSRISQAKMLGLTPEGLEKNSRRLLDSKTVEVY
KAYEVEMRKANSLDFDDLLMKTYDLFRMYPDVLEMYQKKFQYIMVDEYQDTNHIQYLLVQ
MLAKAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFKEAKVIKLEENYRSTGNIVTAAT
SVIKNNTERKDKTLFTSNDKGDLIRVREEKNEYDEARFVAKTIQTMMNEGEGSYNDYAIF
YRTNAQSRVLEEQLRTLSIPYRLVGGVRFYERMEIKDMISYMKLSINPADDIALKRIINV
PARGIGKTTIEKIEEFAAQNFLTMFDAAKLACDQRIFNAGTTGKIRRFLDLMEELQGQAQ
SFSIVDFYHIVLDRTDYLTALKKDESPEAVARIENLEELDNAIAQFAKERGDEATLISYL
EEMALVSDVDSLNQEQNSVTMMTLHISKGLEYPYVFVVGMEENLFPSSRTVDADGDEDVE
EERRLAYVGMTRARQKLWLTYTKMRRVWGQEQFNPPSRFIKEIPQELIEFKSGAEGSRFV
SRFASSGYQSGSQDSGSYGSRGYGKSSSSDFDDYSQDFPDYDEAPAGGASYSKGMRVRHP
TFGAGTIYATEGTGENLKVSVMFTDNTVKKFVVKYARLERI
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggatatacttgaatttgttactaaaaatctgaatccagcacaaaaagaggcggttgag
acgactcagggacctttacttattcttgccggcgcaggctctgggaagactcgagtcctt
acccatcgcatggccaacatcatcggccaaggcattgcctccccagatgagatcctctgt
gtgacctttaccaataaggccgccaaagagatggagcaccgaatttacaaagttttatcc
gatatgggagtgatggttcactcacctctttggatcaataccttccatagcttctgcgtg
cgtattcttcgccaacacatcactcttttagactataaaccgttctttggaatttatgat
gcctcggattctttaagccagattaaaaaagttatgacggctttgaatatcaacgacaag
atgtatccagcgaagaacttccaaagccgcatcagtcaggccaaaatgttaggtctgact
ccagagggcttagagaaaaactctcgccgtttattggattcaaaaactgtcgaagtttat
aaggcctatgaagttgaaatgagaaaagccaactctttggacttcgatgatcttcttatg
aagacctatgatcttttcagaatgtatcccgacgtcttagagatgtatcagaagaagttt
caatacatcatggtggatgagtatcaagacacgaaccacattcaatatcttctagtgcaa
atgcttgccaaagctcatcgcaatctttgtgtcgtcggtgatgaggatcagtcgatctat
agctggcgtggagctgacattaaaaacattttggattttgaaaaagattttaaagaagcc
aaagtgattaagcttgaagagaactaccgttcaacgggaaatattgtaacagctgcaact
tcagttattaaaaacaataccgaacgcaaagataaaacgcttttcacgtccaacgacaaa
ggggacttgatccgcgtgcgcgaagaaaagaacgaatatgatgaagcgcgctttgttgca
aaaaccattcagacgatgatgaatgagggcgaaggcagttataacgactacgccatcttc
tatcgcacgaatgcgcaatcgcgagttcttgaggaacaactgcgcaccctttccatcccc
tatcgtctagtcggtggcgtgcgcttctatgagcgcatggaaattaaagacatgatttct
tatatgaagctttcgatcaatccagcggatgatattgctttaaagagaatcattaacgtc
ccagctcgtggtatcggaaaaaccaccattgaaaaaatcgaagagtttgcggcacagaac
ttcctgacgatgttcgatgcggctaagctagcttgtgatcaaagaattttcaatgctgga
acaacgggaaagattcgccgctttttagacctgatggaagagcttcaaggtcaggctcag
tcctttagcattgtggatttctatcacatcgttcttgatcgaacagattacttaaccgct
ctgaaaaaagacgaatccccagaggctgttgcgcgcattgaaaacttagaagaattagac
aatgccattgctcagtttgcaaaggaacgcggagatgaagcaactctcattagctatctt
gaagagatggccttggtgagcgacgtggattctttgaatcaagaacaaaactctgtgacc
atgatgacattacatatttctaagggccttgaatacccgtacgtatttgttgtcggcatg
gaagaaaatcttttcccaagcagtcgcaccgttgatgccgatggcgacgaggacgttgaa
gaagagcgccgtttagcttatgtgggaatgactcgtgctcgtcaaaaactatggctcacc
tatacgaaaatgagaagagtgtggggacaggaacagttcaacccaccttcgcgattcatc
aaagagattcctcaagaactgattgagtttaaatcaggcgctgaaggctcgcgatttgtt
tctcgctttgcatcgtccggttaccaatctggatctcaagattctggatcttatggaagt
cgtgggtatggaaaatcatcttcttcagactttgatgattactctcaagacttccctgac
tacgacgaggctccagcaggaggagcttcttacagcaaaggaatgcgtgttagacatcca
accttcggtgcaggaacgatctatgcgacagaagggaccggtgaaaatctgaaagtcagc
gttatgttcactgacaacactgtcaaaaaattcgtcgtcaaatacgctcgattggagagg
atttaa

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