KEGG   Bacillus cereus ATCC 10987: BCE_0103
Entry
BCE_0103          CDS       T00162                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bca  Bacillus cereus ATCC 10987
Pathway
bca03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BCE_0103 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bca03021]
    BCE_0103 (rpoC)
   03400 DNA repair and recombination proteins [BR:bca03400]
    BCE_0103 (rpoC)
Enzymes [BR:bca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BCE_0103 (rpoC)
Transcription machinery [BR:bca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BCE_0103 (rpoC)
DNA repair and recombination proteins [BR:bca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BCE_0103 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: AAS39039
UniProt: Q73FA3
Position
111964..115575
AA seq 1203 aa
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVA
ASAVNNATFTEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVETRTYAIPYGARLKVIPGQQISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVY
VEQ
NT seq 3612 nt   +upstreamnt  +downstreamnt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaacaattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcgaaagtgcgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctattacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgagccatcttggatgatcttagatgttctaccagtaatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttataccgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacttaggtgcaccaagcattatc
gttcagaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgcttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccaatgtggattaccaaaagag
atggcgcttgaactgttcaaacctttcgtaatgaaagagttagttgaaaaaggattagca
cacaacattaagagtgcgaaacgtaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtattcaggcgtttgaacctacattagtagaaggtcgcgcaatccgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcatcagaagcacaagcagaagctcgtcttcttatgttagcggcacaaaacatcttg
aacccgaaagacggtaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggtgcaatcggtgaaggtatggtcttcaaagatgcgaac
gaggcattacttgcataccaaaatggatatgtacatcttcatacacgtgttgcagtagct
gcaagcgcagtaaacaacgcaacatttactgaagaacaaaagagtatgcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccaacaaattcaaaccttgaaaaagaaacaccagcgaaatatttcgttgaaaaaggtgcg
aacattaaagagattattgctagtcgcgaagaagtggcgccattcagcaagaaaatcctt
ggtaacatcattgcggaagtgtttaaacgtttcaaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttaggattcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggtgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaacccaatcttcatgatgagtgattccggtgcccgtggtaacgcatcgaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcaagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgattctggttactta
acacgtcgtcttgttgacgttgcacaagatgtaatcgttcgtgaagatgattgtggaaca
gatcgcggtttattaattggtgcgattaaagagggtaatgaagttatcgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgttcacgtgtaacactcgccacggtgtatgtaag
aagtgttacggtcgtaacttagcaactggaacagacgtagaggtaggggaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacgttccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaaactcgtacg
tatgctattccttacggtgctcgtctgaaagtaattccaggacagcaaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaagtaatggtacgccaaatgttacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gcaaatgcgaaggtgttactacaaggtaaacaaccagcaacagctagacctgttctactt
ggtattacaaaagcttcacttgaaacagattcattcttatctgcagcatcgttccaagaa
acaactcgtgtcttaactgatgcagcaattaagggtaaacgtgatgagcttctaggattg
aaagaaaatgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgttaaaacaacacaagatgacatgaatgtagaaaacgatgaagtttat
gtggaacagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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