KEGG   Bacteroides caccae: CGC64_13835
Entry
CGC64_13835       CDS       T05064                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
bcac  Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:bcac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcac03032]
    CGC64_13835
   03036 Chromosome and associated proteins [BR:bcac03036]
    CGC64_13835
   03400 DNA repair and recombination proteins [BR:bcac03400]
    CGC64_13835
DNA replication proteins [BR:bcac03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CGC64_13835
Chromosome and associated proteins [BR:bcac03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CGC64_13835
DNA repair and recombination proteins [BR:bcac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CGC64_13835
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF5915 Chlorosome_CsmC DUF1152
Other DBs
NCBI-ProteinID: ASM67944
UniProt: A0A412FMY8
Position
complement(3368239..3368511)
AA seq 90 aa
MNNKEFTSELAERLGYTIKDTAELIGSLLSDMVQELEEGNVIAVQGFGSFEVKKKAERIS
INPASKQRMLVPPKLVLSYKPSNTLKDKFK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataataaggaatttacatctgaactagctgaaagactggggtacaccattaaggat
actgccgaattaataggttctttactgtctgatatggtacaagaactggaagaaggcaac
gtgattgcagtacaaggattcggttcttttgaagtaaaaaagaaagcggaacgtatttca
attaatccggcaagtaaacaacgtatgttggttcctcccaaattggtgttatcttataaa
cctagcaatacattgaaagataagtttaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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