KEGG   Paraburkholderia caribensis: K788_00029275
Entry
K788_00029275     CDS       T04141                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    K788_00029275
  09124 Replication and repair
   03420 Nucleotide excision repair
    K788_00029275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcai03021]
    K788_00029275
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_00029275
Enzymes [BR:bcai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     K788_00029275
Transcription machinery [BR:bcai03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     K788_00029275
DNA repair and recombination proteins [BR:bcai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     K788_00029275
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD GlgS HBB
Other DBs
NCBI-ProteinID: ALL66649
UniProt: A0A0P0RDL4
Position
2:complement(501715..503982)
AA seq 755 aa
MTYVVAVRTLCEFTARRGDLDLRFTPAPSALEGIAGHQAVTARRASGYEAEITLTGTHGG
LTVRGRADGYDRALNRLEEIKTHRGDLERMPANHRALHWAQALVYGHLLCEARALEALTV
ALVYFDIASQKETVLTEQHTAASLRAFFEDQCERFVAWAAREAAHREARNAALNVLRFPY
GEFRSGQRELSVAVFRAARDGHCLMAQAPTGIGKTLGTIFPLLKACGADHLDRVFFLTAK
TPGRALALEAIESLHRGEAALPLRTLELVARDKACEHPDKSCDGDSCPLARGFYDRLPAA
RDTALQARTLDRAAVREAALAHGICPYYLAQEMARWCDVVIGDYNYYFDSSAMLYALTQL
NGWRVAVLADEAHNLPDRARRMYSATLDQHAFRGARHAAPAALKKPFDRLNREWNALNRE
RHAAYEVLPGVPPKLQSALQNLIASIGDQLAETPQSVDENALRFYFDALHFMSLVEQFGD
HSIVDVTLETPHGAARAKPATQICVRNVIPAPFLKPRYAAARATIVFSGTLSPQHFYRDM
LGLPGDTGWLDVEGPFRAEQLNVHVAHHVSTRWRDRERSLEPIVDLIAQQYAARPGNYLG
FLSSFDYLQRVAGSMRERHPQVPIWTQEPRMDESARDAFLARFATGGAGVGFAVLGGAFS
EGIDLVGERLIGAFIATLGLPQMNDVNEQMRRTFDAQFGNGYDYAYLYPGMQKVVQAAGR
VIRTEHDAGVVHLIDDRYRRADVKRLLPRWWKIAT
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgacctacgtcgtcgccgtgcgcacgctctgcgaattcaccgcgcggcgcggcgatctc
gatctgcgcttcacgcccgcgccgtcggcgctcgaaggcatcgccggacatcaggccgtg
acggcgcgccgcgcatccggctacgaagcggagatcacgctgacgggtacgcatggcggt
ctcacggtgcgcggccgcgccgacggctacgaccgggcgttgaaccggctcgaggagatc
aagacgcatcgcggcgatctcgaacggatgcccgcgaatcatcgcgcgctgcattgggcg
caggcgctggtgtatgggcatctgctgtgcgaggcgcgcgcgctcgaagcactgacggtc
gcgctcgtgtatttcgatatcgccagccagaaggaaaccgtgctgacggaacagcacacg
gccgcgtcgctgcgcgcattcttcgaggatcagtgcgagcgcttcgttgcgtgggccgcg
cgggaagcagcgcatcgcgaggcgcgcaacgcggcgttgaacgtgctgcgctttccctac
ggcgagtttcgcagcggtcagcgcgaactgtccgtggccgtgtttcgcgcggcgcgcgac
gggcactgtctgatggcgcaggcgccgacgggcatcggcaagacgctcggcacgatcttt
ccgctgctcaaggcgtgcggagcggatcatctcgaccgtgtgttctttctcacggcaaag
acgccgggccgcgcgctcgcgctcgaagccatcgagtccctgcatcgcggcgaagccgcg
ctgccgttgcgcacgctcgagctcgtcgcgcgcgacaaggcctgcgagcatcccgacaaa
tcctgcgacggcgattcctgtccgctcgcacgcggcttctacgatcgtctgcccgcggcg
cgcgacacggcgttgcaggcgcgcacgctcgaccgcgcagccgtgcgcgaagcggcgctc
gcgcatggcatctgtccgtactatctcgcgcaggaaatggcgcgctggtgcgacgtcgtg
atcggcgactacaactactacttcgacagcagtgcgatgctgtacgcgctcacgcagctg
aacggctggcgcgtcgccgtgctcgccgacgaagcgcacaatctgcccgaccgcgcgcgc
cgcatgtacagcgcgacgctcgatcagcacgcgtttcgcggcgcccgccatgccgcgccc
gcagcgctcaaaaaaccgttcgatcggctgaatcgggagtggaatgcgttgaaccgcgag
cgccatgccgcgtacgaggtgctgcccggcgtgccgcccaaactgcagtcggcgctgcaa
aacctgatcgcatcgattggcgatcagcttgcggaaaccccgcaatccgtcgatgaaaac
gcgctgcgtttctatttcgacgcgctgcatttcatgtcgctcgtcgagcagttcggcgat
cattcgatcgtcgacgtgacgctcgaaacaccgcacggcgcagcccgcgcgaagcccgcc
acgcagatttgcgtgcgcaacgtgattcccgcgccgttcctcaagccgcgctacgccgcc
gcgcgcgcgacgatcgtgttctccggcacgctcagcccgcagcatttctatcgcgacatg
ctcggtctgcccggcgacacgggctggctcgacgtcgaagggccgttcagggcggagcag
ctgaatgtgcatgtcgcgcatcacgtgtcgacgcgctggcgcgaccgcgagcgctcgctc
gaaccgatcgtcgatctgatcgcgcagcagtacgccgcgcgtccgggcaactacctcggc
tttctgagcagcttcgattacttgcagcgcgtcgcgggatcgatgcgcgaacggcatccg
caggtgcccatctggacgcaggagccgcgcatggacgagagcgcgcgtgacgcgttcctc
gcgcgcttcgcgacgggcggcgcgggcgtgggcttcgcggtgctgggcggggcgttttcg
gagggcatcgatctggtcggcgaacggctcatcggcgcgttcatcgcgacgctcggcttg
ccgcagatgaacgacgtcaacgaacagatgcggcgcaccttcgatgcgcagttcggcaac
ggctacgactatgcgtatctgtatccgggcatgcagaaggtcgtgcaggcggcggggcgc
gtgattcgcaccgagcacgatgcgggcgtcgtgcatctgatcgacgaccggtatcggcgc
gcggatgtgaagcgcctgttgccgcgctggtggaagatagcgacatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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