KEGG   Paraburkholderia caribensis: K788_0004130
Entry
K788_0004130      CDS       T04141                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai00270  Cysteine and methionine metabolism
bcai00450  Selenocompound metabolism
bcai00670  One carbon pool by folate
bcai01100  Metabolic pathways
bcai01110  Biosynthesis of secondary metabolites
bcai01230  Biosynthesis of amino acids
bcai04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    K788_0004130
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    K788_0004130
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    K788_0004130
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    K788_0004130
Enzymes [BR:bcai01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     K788_0004130
SSDB
Motif
Pfam: Met_synt_B12 Pterin_bind B12-binding_2 B12-binding MtrH
Other DBs
NCBI-ProteinID: ALL63263
UniProt: A0A0P0R5W1
Position
1:539535..542252
AA seq 905 aa
MTDHTMRLSGLEPFNVTSGTLFINVGERTNVTGSKAFARMILNGQFDEALAVARQQVENG
AQVIDVNMDEAMLDSKAAMVRFMNLIASEPDIARVPIMIDSSKWEVIEAGLKCVQGKAIV
NSISLKEGEESFRHHANLIRRYGAAAVVMAFDEQGQADTYKRKTEICKRSYDILVNEVGF
PPEDIIFDPNIFAIATGIEEHNNYAVDFINATRWIKQNLPYAKVSGGVSNVSFSFRGNDP
VREAIHTVFLYHAIQAGMDMGIVNAGQLGVYADLDTELRERVEDVVLNRREDGTDRLLES
ADKFKTGAAKKEENLEWRNQPVEKRLAHALVHGITNFIVEDTEEARAKIMDGGGRPINVI
EGPLMDGMNVVGDLFGQGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRQLAEAGGDVRAK
GKIVIATVKGDVHDIGKNIVSVVLQCNNFEVVNMGVMVPCNEILAKAKVEGADIIGLSGL
ITPSLEEMAYVASEMQRDDYFRVKKIPLLIGGATTSRVHTAVKIAPHYEGPVVYVPDASR
SVSVASNLLSDEGATKYLDELKSDYDRIRDQHANKKALPLVTLAEARANKAKIDWSAYQP
VKPKFIGRRVFRNFDLNELANYIDWGPFFQTWDLAGPYPAILNDEIVGESARRVFSDAKS
MLARLIQGRWLTANGVIALLPANTVNDDDIEIYTDESRSEVAMTWRNVRQQSVRPVVDGV
MRPNRSLADFIAPKDSGVADYIGMFAVTAGLGVDTKEKQFEQDHDDYSAIMLKALADRFA
EAFAEAMHARVRRDLWGYANNETLSNDELIGEKYRGIRPAPGYPACPDHLVKRDMFDVLQ
AGEIGMSVTESLAMLPAASVSGFYLAHPDSTYFSVGKIGQDQLEEYAQRMSLSKADAQRA
LAPLL
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaccgatcacacgatgcgcctttccggcctcgagccgttcaacgtcacttcggggacg
ctcttcatcaacgttggcgaacgcaccaacgtgacgggctcgaaggcattcgcgcggatg
attctgaacggccagttcgacgaagcgctggccgtcgcgcgccagcaggtcgagaacggc
gcgcaggtcatcgacgtcaacatggacgaagcgatgctcgattcgaaagcggcgatggtg
cgcttcatgaatctgatcgcgtcggagccggacatcgcgcgcgtgccgatcatgatcgac
tcgtcgaagtgggaggtgatcgaagcgggcctcaagtgcgtgcagggcaaggcgatcgtc
aactcgatctcgctgaaggaaggcgaagagagcttccgccatcacgcgaacctgattcgc
cgctacggcgcggcggccgtcgtgatggcgttcgacgagcaaggccaggccgacacgtac
aagcgcaagacggaaatctgcaagcgctcgtacgacattctcgtcaatgaagtcggcttc
ccgcccgaagacatcattttcgacccgaacatcttcgcgatcgcaacgggtatcgaagag
cacaacaactacgccgtcgacttcatcaatgcaacgcgctggatcaagcagaacctgccg
tatgcgaaggtgagcggcggcgtgtcgaacgtgtcgttctcgttccgcggcaatgacccg
gtgcgcgaagcgattcacaccgtgttcctctaccacgccattcaggcgggcatggacatg
ggcatcgtcaacgcgggccagttgggcgtgtacgcggacctcgacaccgagttgcgcgag
cgcgtcgaagacgtcgtgttgaatcgccgcgaggacggcaccgaccgtctgctcgaaagc
gccgacaagttcaagacgggcgcagcgaagaaagaagagaacctcgaatggcgcaatcag
cctgtcgagaagcgtctcgcccatgcgctcgtccacggcatcacgaacttcatcgtcgaa
gacacggaagaggcgcgcgccaagatcatggacggcggcggccgcccgatcaacgtgatc
gaagggccgttgatggacggcatgaacgtcgtcggcgatctgttcggccaggggaagatg
ttcctgccgcaagtcgtgaagtcggcgcgcgtgatgaaacaggcggtcgctcacctgatt
ccgttcatcgaagaagagaagcgccagcttgccgaagcgggcggcgacgtgcgcgcgaaa
ggcaagatcgtcatcgcgacggtgaagggcgacgtgcacgatatcggcaagaacatcgtg
tccgtcgtgcttcagtgcaataacttcgaagtggtcaacatgggcgtgatggtcccgtgc
aacgagattctcgcgaaggcgaaggtcgaaggcgcggacatcatcgggctgtcgggtctg
attacgccgtcgctcgaagagatggcctatgtcgcctcggaaatgcagcgagacgactat
ttccgcgtgaagaagattccgctgctgatcggcggcgcaaccacttcgcgcgtgcacacg
gccgtgaagatcgcgccgcactacgaaggcccggtcgtgtatgtgccggacgcctcgcgc
tcggtgtcggtcgcgtcgaacctcttgtccgacgaaggcgcgacgaagtatctcgacgag
ctgaagtccgactacgaccgcatccgcgaccagcatgcgaacaagaaggcgctgccgctc
gtcacgctcgccgaggcacgcgcgaacaaggcgaagatcgactggagcgcctatcagccg
gtcaagccgaaattcatcggccggcgcgtgttcaggaacttcgatctgaacgaactcgcg
aactatatcgactggggtccgttcttccagacgtgggatctcgcgggtccgtatcccgcg
atcctgaacgacgagatcgtcggcgaatcggcgcggcgcgtgttctcggatgcgaagtcg
atgctcgcgcgcctgatccagggccgctggctgacggcaaacggcgtgatcgcgctgctg
cccgccaacaccgtcaacgacgacgacatcgaaatctacacggacgaatcacgcagcgaa
gtcgcgatgacgtggcgcaacgtacgccagcaaagcgtgcgtcccgtagtggacggcgtg
atgcgcccgaaccggtcgctggccgacttcatcgcgccgaaggactcgggcgtcgccgac
tacatcggcatgttcgcggtcacggcgggtctcggcgtcgacacgaaggaaaagcagttc
gaacaggatcacgacgactacagcgcgatcatgctgaaggcgcttgccgaccgcttcgcc
gaagcctttgccgaagcgatgcatgcacgcgtgcgccgcgatctgtggggctacgcgaac
aacgaaacgctgtcgaacgacgagctgatcggcgagaagtatcgcggcatccgccccgcg
ccgggctatccggcgtgcccggatcacctcgtcaagcgcgacatgttcgacgtcctgcaa
gcgggcgaaatcggcatgagcgtgacggaatcgctcgcgatgctgcccgccgcgagcgtc
tccggcttctacctcgcgcatcccgacagcacgtatttctcggtgggcaagatcggccag
gatcagctggaggagtacgcgcagcgcatgtcgctgtcgaaggcggatgcccagcgcgca
ctcgcgccgttgctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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