KEGG   Burkholderia cepacia DDS 7H-2: DM42_3280
Entry
DM42_3280         CDS       T03302                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
bced  Burkholderia cepacia DDS 7H-2
Brite
KEGG Orthology (KO) [BR:bced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bced03021]
    DM42_3280 (rpoS)
Transcription machinery [BR:bced03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DM42_3280 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_20 HTH_Crp_2
Other DBs
NCBI-ProteinID: AIO49501
Position
1:3538267..3539355
AA seq 362 aa
MPKSKRHEPQAESEKISRATQASVGRVGASTDDEDDVAENERDLEARDAEAEGGDDEREG
RQEAAPDVDDFRTLLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGEAAERREASIDDIAYLTGKTA
EEVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgccgaaatcgaagcgccacgagccgcaagccgagtctgagaagatcagtcgtgccacg
caagcatcggtggggcgagtgggtgcttcgacggacgacgaagacgacgtcgcggaaaac
gaacgtgatctcgaggcacgcgacgccgaggccgagggtggcgacgacgagcgcgaaggc
cgtcaggaagccgcgcccgacgtcgacgatttccgcacgctgctgcaggccgaactcacg
gccgacacgatccagcattacctgaaccgcatcagcgtgaagccgctgctgaccgtcgag
gaagagcagcgctattcgcgtcttgcgaaggccggcgaattcgaggcgcggcaggtgatg
atcgagcgcaacctgcgtctcgtcgtcagtatcgcgaaggggtacctgaaccgcggcgtg
ccgctgctcgacctgatcgaggaaggcaacctcggcctgatgcacgcgatcgagaaattc
gacccgacgcgcggttttcgcttctcgacctacgcgacgtggtggatccggcagagcatc
gagcgggcgatcatgaaccaggcccgcacggtgcgcctgcccgtgcacgtgatccgcgaa
ctgaaccaggtgctgcgcgcgaagcgccacctcgaaaagaattcgatgtcgacgggcgag
gcggccgaacgccgtgaagccagcatcgacgacatcgcctatctcaccggcaagaccgcc
gaggaagtcaccgatatcctcgcgctcaacgaacacacggcgtcgctcgacgcgccgctc
gacctcgatcccgcgagcagcctgctcgacctgctgcccgacgaccagagccagtcgccc
gacgccgaggtgcagcaccgcgagctcgaaacgctgacgcgcgcgtggctgtcgcggctg
tccgacaagcaccggcacgtgatcgagcgtcgcttcggcctgaaccacatcgaaccggcg
acgcttgaggagctcgccgacgagatggggctcacgcgcgagcgcgtgcggcagatccag
caggaagcgctggtgcgcctcaagcggttctttgcctccaacggcgtgcgcaaggacgcc
gttctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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