KEGG   Burkholderia cepacia DDS 7H-2: DM42_4667
Entry
DM42_4667         CDS       T03302                                 
Name
(GenBank) hypothetical protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
bced  Burkholderia cepacia DDS 7H-2
Pathway
bced03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bced00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DM42_4667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bced03000]
    DM42_4667
   03400 DNA repair and recombination proteins [BR:bced03400]
    DM42_4667
Enzymes [BR:bced01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     DM42_4667
Transcription factors [BR:bced03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    DM42_4667
DNA repair and recombination proteins [BR:bced03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DM42_4667
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC
Other DBs
NCBI-ProteinID: AIO45187
Position
2:1284775..1286226
AA seq 483 aa
MRLDPDTCYDALLSRNRRFDGWFFVGVATTGVYCRPVCPVKPPKAQNCSYYPTAAAAEKA
GFRPCMRCRPELAPGHGLLDLSGNLADAAATLIDDGFLNAHSVAALARRVGVTERHLRRI
FGAQFGVSPVEFAQTQRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQRYGLNPL
RLRKGAGASADGDMTFPLPYRPPFAWADLMRFLAQRQIDGVERIDARGYARIVELPNRND
GGRAAGWLSVAHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAHLGDLAN
GSPGLRVPGAFDGLEMAIRAIAGEQLAAAQADTPLLARIAARFGNPVDGAPPGLAHALPG
AATLAALPPSVLETIGIERDTAHAIVSLARAVDDGTLALEPMAPLDATLAALRALPGFDE
RAVQYVAMRAMAWPNAFPADDAWLPGRTERTRVSSSAPHAARWAPWRAYAALHVWRLHGE
RLR
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgcgcctcgatcccgacacctgctacgacgccctgctttcgcggaaccgccgcttcgac
ggctggttcttcgtcggcgtcgcgacgaccggcgtgtactgccgcccggtctgcccggtg
aagccgccgaaagcgcaaaactgcagctactacccgaccgccgcggccgccgagaaagcc
ggcttccggccctgcatgcgctgccgccccgagctcgcgcccggccacgggctgctcgac
ctgtccggcaatctcgccgacgcggccgcgacgctgatcgacgacggtttcctgaacgcg
cattccgtcgcggcgctcgcacggcgcgtcggcgtgaccgaacgccatctgcggcggatc
ttcggcgcgcagttcggcgtgtcgccggtcgagttcgcgcagacgcagcgactgctgatg
gccaagcggctgctgaccgataccgcgctgccggtggccgtcgtcgcgtcgacggccggg
ttcggcagcgtacggcgcttcaacgacctgttccgccagcgctacggcctcaatccgctg
cggctgcgcaaaggagccggcgcgtcggccgacggcgacatgactttcccgctgccgtac
cggccgccgttcgcgtgggccgacctgatgcgctttctcgcacagcggcagatcgacggc
gtcgagcggatcgacgcgcgcggttatgcacgcatcgtcgaactgccgaaccggaacgac
ggcggacgcgcggccggctggctgtccgtcgcgcacgtgccgcagcgcttcgcgctcgcc
gtcaccgtgtcgcccgcgctgacgccggtcgtgccggccgtgctcgcgcgcgtgcgccgg
ctgttcgatctcgacagccgccccgacgtgatcgatgcgcatctcggcgatctcgcgaac
ggttcgccgggcctgcgcgtgcccggcgcgttcgatggcctcgagatggcgatccgtgcc
atcgcgggcgagcagcttgcggcggcgcaggccgatacgccgctgctcgcacggatcgcg
gcacgcttcggcaatccggtcgatggcgcgccgccgggcctcgcgcatgcgctgcccggc
gccgcgacgctggcggcgctaccgccttcggtcctcgaaacgatcggcatcgagcgcgac
acggcgcacgcgatcgtgtcgctcgcccgcgcggtcgacgacggcacgctcgcgctcgaa
ccgatggcgccgctcgacgcaacgctcgccgcgctgcgcgcgctgcccggcttcgacgaa
cgcgcggtgcagtacgtcgcgatgcgcgcgatggcgtggccgaatgcgttccccgccgac
gacgcgtggctgcccggccgcaccgagcgcacgcgcgtatcatcatcggcgccgcatgcg
gcacgctgggcgccgtggcgcgcgtatgccgcgctgcacgtgtggcgccttcatggagag
aggttgcgatga

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