KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_889
Entry
DM39_889          CDS       T03308                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen00540  Lipopolysaccharide biosynthesis
bcen01100  Metabolic pathways
bcen01250  Biosynthesis of nucleotide sugars
Module
bcen_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    DM39_889 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:bcen01005]
    DM39_889 (rfaD)
Enzymes [BR:bcen01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     DM39_889 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:bcen01005]
 Core region
  DM39_889 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd RmlD_sub_bind 3Beta_HSD NAD_binding_4 Polysacc_synt_2 NAD_binding_10 KR
Other DBs
NCBI-ProteinID: AIO33841
UniProt: A0A088U9I8
Position
1:960308..961300
AA seq 330 aa
MTLIVTGAAGFIGANIVKALNERGETRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FARGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQRAQFLYASSAAIY
GGSTRFVEERGVEAPLNVYGYSKFLFDQVIRRVLPSAQSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFVSVEDVAKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIASTVVNTLRALDNLPPLTLAQQVEQGLIEYVSFPDALRGKYQCFTQADQ
TKLRAAGYDAPFLTVQEGVDRYVRWLSGQV
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaccctcatcgtcaccggcgcagccggttttatcggcgcaaacatcgtcaaggcgctc
aacgagcgcggcgaaacgcgcatcatcgcggtcgacaacctgacgcgcgcggacaagttc
aaaaacctcgtcgattgcgagatcgacgactatctcgacaagaccgaattcgtcgaacgc
tttgcgcgcggagatttcggcaaggtgcgcgcggtattccacgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaactttcgctacagccgcgcggtg
ctcgatgcatgcctcgcgcagcgcgcgcagttcctgtacgcgtcgtcggccgcgatctac
ggcggctcgacgcgattcgtcgaagagcgcggcgtcgaggcgccgctgaacgtgtacggt
tattcgaagttcctgttcgaccaggtgatccgccgcgtgctgccgagcgcgcaaagccag
atcgcgggcttccgctatttcaacgtgtacggcccgcgcgagacgcacaagggccgcatg
gcgtcggtcgcgttccacaacttcaaccagttccgcgcggaaggcaaggtgaagctgttc
ggcgagtacaacggctatgcaccgggcgagcagacgcgcgacttcgtgtcggtcgaggac
gtcgcgaaggtgaacctgttcttcttcgaccatccggagaagtcgggcatcttcaatctc
ggcacgggccgcgcgcagccgttcaacgatatcgcgtcgacggtcgtcaacacgctgcgc
gccctcgacaacctgccaccgctgacgctcgcgcagcaggtcgagcagggactgatcgag
tacgtgtcgttccccgacgcgctgcgcggcaagtaccagtgcttcacgcaggccgaccag
acgaagctgcgcgcggccggctacgatgcgccattcctgaccgtgcaggaaggcgtcgac
cgctacgtccgctggctgtccggccaggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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