KEGG T02291: BCK

Bacillus cereus FRI-35: BCK_08065

Entry

BCK_08065         CDS       T02291

Name

(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family protein

K05592

ATP-dependent RNA helicase DeaD [EC:3.6.4.13]

Organism

bcer Bacillus cereus FRI-35

Pathway

bcer03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:bcer00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCK_08065
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcer03019]
    BCK_08065
   03009 Ribosome biogenesis [BR:bcer03009]
    BCK_08065
Messenger RNA biogenesis [BR:bcer03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BCK_08065
Ribosome biogenesis [BR:bcer03009]
Prokaryotic type
  rRNA helicases
   BCK_08065

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII CMS1 AAA_19

Other DBs

NCBI-ProteinID:

AFQ09520

Position

1623539..1624984

AA seq 481 aa
MSKKGFFEYKLSKEIVRALTGLGYDHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK
QKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTNRMT
MLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEAIEDEKLSLLKDVTTIE
NPDSCIIFCRTQENVDHVYRQLKRANYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATD
VAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYENRFLEEIEEY
IGFEIPKAIGPSKEEVMKGKAAFEEKIHAKPIIKKDKNADINKGIMKLYFNGGKKKKIRA
VDFVGTIAKIKGVTAEDIGIITIQDNVSYVEILNGKGPLVLKVMKTTTIKGKQLKVHEAI
K

NT seq 1446 nt +upstreamnt +downstreamnt
atgagtaaaaaagggttttttgagtataaattaagtaaagaaattgtaagggcacttacg
gggttagggtatgatcatccaacagaagtacaaggtgaggttattccagtcgcattacaa
aagaaggatcttgttgtgaagtcccagacgggaagtggaaaaacagcttcatttggtatt
ccactttgtgagatggtggagtgggaagagaataaaccacaagcattagttttaacacca
acgagagagcttgcggtacaggtgaaagaagatattacaaatatagggcgattcaaaaga
attaaagccgccgcaatttatggtaagtccccatttgcacgtcaaaaattagagttaaag
caaaagacgcatattgtagtagggactccagggcgtgtattggatcatattgaaaaaggg
accctttctttagagcgattaaaatatttagtgattgatgaagcggacgaaatgctaaac
atgggctttatcgatcaagtagaggcaattattgatgaattacctacaaatagaatgaca
atgctattttcagcaactttaccggaagatgttgaaaggttatcacgtacatatatgaat
gcaccaactcatattgaaattaaagcggctgggattacgacggataaaattgaacatacc
ctttttgaggcgatagaagacgagaagctttcactacttaaagatgtaacaacgattgag
aatcctgatagctgtattattttctgccgtacacaagaaaatgtagatcatgtatataga
caattaaaacgagctaactatccttgtgacaaaatacatggtggtatggtacaagaagat
cgttttgaagtcatggatgattttagaaaaggaaaattccgttatttagtagcaacagac
gtagctgcgagaggaattgatattgataatattacacatgttattaattatgatattcca
cttgaaaaagaaagctatgtacatcgtactggaagaacgggacgagctggaaatagtgga
aaagctattacatttataacaccatatgaaaatagatttttagaagagattgaggagtat
attggctttgaaattccaaaggcaattggaccttcaaaagaagaagttatgaaagggaaa
gctgcatttgaagaaaagatacatgctaaaccaattataaagaaagataaaaatgcagac
atcaacaaaggcattatgaagctgtactttaatggcgggaagaaaaagaaaattagggcg
gtagatttcgtcggtacaattgctaaaattaaaggtgttacagcagaagatataggtatt
attacgatacaagataatgtttcttacgtcgaaatattaaatggaaaaggaccacttgtc
ttgaaagtcatgaagactacaacgattaaagggaaacaactaaaagttcatgaagcaatt
aagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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