KEGG   Brucella ceti TE10759-12: V910_101980
Entry
V910_101980       CDS       T02934                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bcet  Brucella ceti TE10759-12
Pathway
bcet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    V910_101980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcet03019]
    V910_101980
   03016 Transfer RNA biogenesis [BR:bcet03016]
    V910_101980
Enzymes [BR:bcet01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     V910_101980
Messenger RNA biogenesis [BR:bcet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     V910_101980
Transfer RNA biogenesis [BR:bcet03016]
 Prokaryotic type
  tRNA degradation factors
   V910_101980
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1
Other DBs
NCBI-ProteinID: AHB00289
Position
1:complement(2018639..2020783)
AA seq 714 aa
MFNTHKVEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQH
DLENNPDILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVA
GTSEAVLMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQPEDLSE
LEAKVLAVVENDLREAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEMSAEQFATIFK
HLQAKIVRWNILDTGNRIDGRDLSTVRSIVSEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQMIDALTGTYKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAA
EQFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMA
KAISSSRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNGKEIEAAKKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLAADR
VAKTTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVAEKKKEEVDAE
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgttcaatacccataaagttgaaatcgaatggggcggacgtccgctcacactcgaaacc
ggcaagattgcccgtcaggctgacggcgctgttctcgccacctatggcgaaaccgccgtt
ctcgcaactgtcgtttctgccaaggaaccgaagccgggccaggacttcttcccgctgacc
gtcaattatcaggaaaagacctatgcagccggcaagattcccggcggctatttcaagcgt
gaaggccgtccgagcgaaaacgaaaccctcgtttcgcgcctgatcgaccgtccgatccgc
ccgcttttcgttgacggctacaagaacgacacgcaggtcgtcattaccgttctccagcac
gatctggaaaacaacccggacatcctgtcaatggttgcggcatctgccgccctcaccatt
tcgggcgtgcctttcatgggtccgatcagcggcgcgcgcgttggttatatcgatggcgaa
tatgtcctgaacccgaatatcgatgaaatgccggaatccaagctcgatctggtggttgcc
ggtacgtcggaagcggttctgatggtcgaatcggaagcgcaggaactgcccgaagatgtc
atgctcggcgccgtcatgtttggccacaagagcttccagccggtgatcgatgcgatcatc
aagcttgccgaagttgccgccaaggaaccgcgtgacttccagccggaagacctgtcggaa
ctggaagccaaggtgctggccgttgtggaaaacgacctgcgcgaagcttacaagatcact
gaaaagcaggcgcgctacgcagccgttgatgccgccaaggccaaagccaaggaacatttc
ttccccgaaggcgtggaagaaaccgaaatgtcggcggaacagttcgcgaccattttcaag
catctgcaggccaagatcgttcgctggaacattctcgacacgggcaaccgtatcgatggc
cgtgacctttcgaccgttcgttcgatcgtttcggaagtcggcatcctgccgcgcacccac
ggttccgcgctcttcacccgcggtgaaacgcaggccatcgtcgttgccacgctcggcacc
ggcgaagacgaacagatgatcgatgcgctgacgggaacctacaaggaatccttcatgctg
cattacaatttcccgccctattcggtcggtgaaacgggccgcatgggttctccgggccgc
cgcgaaatcggccatggcaagcttgcctggcgcgcaatccatccgatgctgcctgccgcc
gaacagttcccctatacgatccgcgctgtttccgaaatcacggaatcgaacggttcttcc
tcgatggcaaccgtttgcggcacctcgctggcgctgatggatgccggtgtgccgatcgtg
cgccccgtcgccggtatcgccatgggtctcatcaaggaaggcgaacgtttcgccgttctt
tccgacattctcggcgatgaagatcacctcggcgacatggacttcaaggtggccggtacc
gaattcggcatcacatcgctacagatggacatcaagatcgacggtatcaccgaagagatc
atgaaggtcgctctggaacaggcaaagggtggccgcgttcacattctcggcgaaatggcc
aaggccatctcctcctcgcgcgctgaactgggcgagtttgccccgcgcatcgaagtgatg
aacattccgaccgacaagatccgcgacgtgattggctccggcggcaaggttatccgcgag
atcgtggaaaagaccggcgccaagatcaacatcgaggacgatggtacggtcaagatcgcg
tcgtcgaacggcaaggaaatcgaagccgccaagaagtggattcactccattgtggctgaa
ccggaagtcggcgaaatctatgaaggcacggtcgtcaagaccgccgatttcggcgctttc
gtgaacttcttcggcccgcgtgacggtctggttcatatctcgcagctcgctgccgaccgt
gttgccaagaccaccgatgtggtcaaggaaggccagaaggtctgggtcaagctcatgggc
ttcgacgaacgcggcaaggttcgcctgtcgatgaaggtcgtcgatcaggaaaccggcaag
gaaatcgttgctgaaaagaagaaggaagaagttgacgctgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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