KEGG   Burkholderia cenocepacia HI2424: Bcen2424_0207
Entry
Bcen2424_0207     CDS       T00415                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bch  Burkholderia cenocepacia HI2424
Pathway
bch03420  Nucleotide excision repair
bch03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bcen2424_0207
   03430 Mismatch repair
    Bcen2424_0207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bch03400]
    Bcen2424_0207
Enzymes [BR:bch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bcen2424_0207
DNA repair and recombination proteins [BR:bch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bcen2424_0207
   MMR (mismatch excision repair)
    Other MMR factors
     Bcen2424_0207
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2
Other DBs
NCBI-ProteinID: ABK06961
Position
1:229619..231355
AA seq 578 aa
MADIQSPAELASQCALDAMFQCLDEGRSFRLEAGAGAGKTYSLIKALQYLIERNRHGFPK
KNQQIACITFTNVARDEIAARTDKSPLVFCETNHAFCWSLIRGFQKQLRSLVEAMPHWQE
RLAEVGGTLGARMVEYSLGHRSIREDRVSIHHDDVLPLTISLMEHLKFRRMVADRFPIIL
VDEYQDTDRDWVEAIKRLFLSNPDGPLFGFFGDHWQKIYGDGCGRLEHESVTEIGKEANF
RSVKTIVDCLNRMRPELRQEVRDPDSVGHVSVFHTNDWVGQRRAGGHWAGDLPADVGHQA
LEHVKELLAQQGWDLAPGSTKILMLTHRLLATEQGYTSLPTVFRYNDAFTKKEHPHIAYL
VDELEPACDAFAANRFGVMFEALGGTTPLLRSHADKAAWHNAMTRVLELRATGTVGDVID
HLLDQRKPRLPDAIEKRERELRDFDRTAGEEMPERLAEVERLRAVPYAEISALRAYLDGH
SPFETKHGVKGAEFDNVLVVIGRGWNQYNFGEMLGLAAGQAIPAAREESFERNRNLFYVA
CSRPKRRLALLFTQLLSPVAMGTLEQWFSPESVHAVVL
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggctgatatccaatctccggccgagctggcgagtcaatgtgccctcgacgcaatgttt
caatgcctggatgaaggacggagtttccggctcgaagccggcgctggtgccggcaagaca
tattccctgatcaaggcgttgcagtatctcatcgagcgtaaccggcatggtttcccgaaa
aagaatcagcagattgcgtgcattacattcacgaacgttgccagggacgagattgccgct
cgtactgacaagagcccattggtgttctgcgagactaaccacgccttctgctggtccctg
atcagaggtttccagaagcagctaaggtccttggtggaagcaatgccgcactggcaggag
cgactggcagaagtcggcggcacgctcggcgcccgcatggtcgagtacagcctggggcac
cgctcaattcgcgaggaccgtgtatcgatccaccatgacgatgtgctgcccctcacgatt
tccctgatggagcacctgaagttccgccggatggttgcggatcgctttcccatcatcctg
gtggacgaatatcaggacactgacagggattgggtcgaggcgatcaagcggcttttttta
agcaatccggatggaccgctgttcggcttcttcggagatcactggcagaagatctatggc
gatgggtgcggccggcttgagcacgagtccgtaacggaaatcggaaaggaggccaacttc
cgctcggtgaagacgatcgtggattgtcttaaccggatgcggcctgagttgcgccaggaa
gtcagggacccggattctgtgggccacgtgagcgtttttcataccaacgactgggtgggg
caacgccgagccggaggacattgggccggcgaccttccggccgatgtcggtcatcaggcg
cttgagcacgtcaaggagctcctggcacagcaaggatgggatcttgcgccggggagcacg
aagatcctgatgttgacgcacaggctgctcgcaaccgagcagggctacaccagcctgcca
accgtttttcgctacaacgacgccttcaccaagaaagagcatccgcatattgcctatctc
gtcgatgaactcgaaccggcctgcgacgcgtttgcggcaaaccggttcggagtgatgttc
gaggcgctcggcgggacgacgccacttcttcgcagccatgcggacaaagcggcctggcac
aatgcaatgacccgcgtcctggaacttcgcgcgacgggcacggttggagacgtgatcgat
catcttcttgatcaacgcaagccccggcttcctgacgcgatcgaaaagcgcgaacgcgaa
ctacgcgacttcgatcggactgccggcgaagagatgccggaaaggcttgccgaagttgag
cgactgcgcgctgttccctacgcggagatatcagcattgcgggcgtacctggacggtcat
tcaccctttgagaccaagcacggagtgaagggtgccgaattcgacaacgtcctggtcgtt
atcggtcggggatggaatcagtacaactttggcgagatgctcgggttggcggctggacaa
gcgattccggcagcgagggaggagtctttcgagcgcaaccgcaatctgttctatgtcgcg
tgttctcgccccaaacggcgccttgcactgctattcacccagttactgtcgccggtggcg
atgggcacgctggaacaatggttttcgcccgagagcgttcacgccgtcgtgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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