KEGG   Burkholderia cenocepacia HI2424: Bcen2424_1820
Entry
Bcen2424_1820     CDS       T00415                                 
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
bch  Burkholderia cenocepacia HI2424
Brite
KEGG Orthology (KO) [BR:bch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bch03021]
    Bcen2424_1820
Transcription machinery [BR:bch03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Bcen2424_1820
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 HTH_20 HTH_Crp_2
Other DBs
NCBI-ProteinID: ABK08571
Position
1:complement(2022171..2023259)
AA seq 362 aa
MPKSKRHEPQAESEKISRATQASVGRVGASTDDEEDVAENERDLEARDADADGGDDEREG
RQEAAPDVDDFRTLLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGEAAERREASIDDIAYLTGKTA
EEVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgccgaaatcgaagcgccacgagccgcaagccgagtctgagaagatcagtcgtgccacg
caagcatcggtggggcgagtgggtgcttcgacggacgacgaagaggatgtcgcggaaaac
gaacgtgatctcgaggcacgcgacgccgacgcggacggtggcgacgacgagcgcgaaggc
cgccaggaagccgcgcccgacgtcgacgatttccgcacgctgctgcaggccgagctcacg
gccgacacgatccagcattacctgaaccgcatcagcgtgaagccgctgctgaccgtcgag
gaagagcagcgttattcgcgtctcgcgaaggccggcgaattcgaggcgcggcaggtgatg
atcgagcgcaatctgcggctcgtcgtcagtatcgcgaagggctacctgaaccgcggcgtg
ccgctgctcgacctgatcgaggaaggcaacctcggcctgatgcacgcgatcgagaaattc
gacccgacgcgcggtttccgtttctcgacctacgcgacgtggtggatccggcagagcatc
gagcgggcgatcatgaatcaggcccgcacggtgcgcctgcccgtgcacgtgatccgcgaa
ctgaaccaggtgctgcgcgcgaagcgccacctcgaaaagaactcgatgtcgacgggcgaa
gcggccgaacgccgcgaagccagcatcgacgacatcgcctatctcaccggcaagaccgcc
gaggaagtcaccgatatcctcgcgctcaacgagcacacggcgtcactcgatgcgccgctc
gacctcgatcccgcgagcagcctgctcgacctgctgcccgacgaccagagtcagtcgccc
gacgccgaggtgcagcaccgcgagctcgaaacgctgacgcgcgcgtggctgtcgcgtctg
tccgacaagcaccggcacgtgatcgagcgccgcttcggtctgaaccacatcgaaccggcg
acgctcgaggagctcgccgacgagatggggctcacgcgcgaacgcgtgcggcagatccag
caggaagcgctggtgcgcctcaagcggttcttcgcctccaacggcgtgcgcaaggacgcc
gttctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system