KEGG   Burkholderia cenocepacia HI2424: Bcen2424_3872
Entry
Bcen2424_3872     CDS       T00415                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bch  Burkholderia cenocepacia HI2424
Pathway
bch03030  DNA replication
bch03410  Base excision repair
bch03420  Nucleotide excision repair
bch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bcen2424_3872
   03410 Base excision repair
    Bcen2424_3872
   03420 Nucleotide excision repair
    Bcen2424_3872
   03440 Homologous recombination
    Bcen2424_3872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bch03032]
    Bcen2424_3872
   03400 DNA repair and recombination proteins [BR:bch03400]
    Bcen2424_3872
Enzymes [BR:bch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bcen2424_3872
DNA replication proteins [BR:bch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Bcen2424_3872
DNA repair and recombination proteins [BR:bch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Bcen2424_3872
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bcen2424_3872
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HGTP_anticodon
Other DBs
NCBI-ProteinID: ABK10609
Position
2:733158..735911
AA seq 917 aa
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTERVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLTQYDTLDGVIEHAADIKGVVGDNLRRALDFLP
LGRQLVTVDTSCDLTPHLESIEASLKSDGEARDLLRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVIAADVVREYDTIQTWEQFDAWFAKIDAAALTAFDTETTALDPMLARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVVESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHHALYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDAR
LHAQSTEIATRLIELEGEAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPTTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRATAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDGWLTRDQLASRMIMQVHDELVLEVPEGELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgccttgcaggtcgagccgatccacggc
gccgtgcgcgcgctcggctggccgctgctgatggtcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtgaccgagcgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgaccgcgacggcgtgatcgcgaagttcggtgtgccgcccgagcgcatcatc
gactatctcgcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctgacgcaatacgacaccctcgacggcgtgatcgaacac
gcggccgacatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcggccgccagctcgtgaccgtcgatacgtcgtgcgatctcacgccgcatctcgaatcg
atcgaagcctcgctcaagagcgacggcgaggcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgacagcgcgcccgcggaaggtgggggc
gccgatgcgccggaaggcgagccggccccggtgatcgcagccgacgtcgtgcgcgaatac
gacacgatccagacttgggaacagttcgacgcgtggttcgcgaagatcgacgcggccgcg
ctgaccgcgttcgacaccgagaccaccgcgctcgatccgatgctcgcgcggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggcggcctacctgccggtcgcgcaccgcggcccc
gacatgcccgagcagcttccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtacgtggtcgaa
tcgcaccgcacacacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtacgaggacgtggcgggcaagggcgcgaagcagatcggtttcgacgaagtggcgctc
gcgcaggccgccgaatacgcagccgaagatgccgacatcacgctgcagcttcatcacgcg
ctgtatccgcaggtcgcacgcgagccgggcctcgagcgcgtgtaccgcgagatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcacgggcgtgctgatcgacgatgcgcgt
ctgcacgcgcagagcaccgaaattgcgacgcgcctgatcgagctcgagggcgaggcgtac
gaactggcgggcggcgaattcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaagctggccgaggactacccgctgccgaagctgctgctcgagcatcgc
gggttgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaaccccacc
accggccgcgtgcacacgaactatgcgcaagcggtcgcggtcacgggccgccttgcgtcg
aacgaccccaatcttcagaacattccggtgcgcacggccgaagggcggcgcatccgcgag
gcgttcatcgcgtcgccgggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcgactgccgccgaggtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtaatcaacttcgggctcatctacgggatgagcgcattc
gggctcgcatcgaatctcggcatcacgcgcgacgcggcgaagctctatatcgaccgctat
ttcgcccgctatccgggcgtcgcgcagtacatggaagatacgcgcgcgacggcgaaggag
aagggctacgtcgaaaccgttttcggccgccgtctctggctgccagagatcaacggcggt
aacggcccgcgccgccaggcggccgagcgtgcggccatcaatgcaccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacggctggctcacgcgcgaccag
ctcgcatcgcgaatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgaaggc
gagctatcgctcgtgcgcgagaaactgccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgccgaagtgggtgccggcgcgaactgggaagaggcacactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system