KEGG   Burkholderia cenocepacia HI2424: Bcen2424_6889
Entry
Bcen2424_6889     CDS       T00415                                 
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bch  Burkholderia cenocepacia HI2424
Pathway
bch03030  DNA replication
bch03430  Mismatch repair
bch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bcen2424_6889
   03430 Mismatch repair
    Bcen2424_6889
   03440 Homologous recombination
    Bcen2424_6889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bch03032]
    Bcen2424_6889
   03400 DNA repair and recombination proteins [BR:bch03400]
    Bcen2424_6889
Enzymes [BR:bch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bcen2424_6889
DNA replication proteins [BR:bch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bcen2424_6889
DNA repair and recombination proteins [BR:bch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bcen2424_6889
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABK13618
Position
p1:101567..102448
AA seq 293 aa
MRYPNRATAPLELQTKTELKQARRNLADGQAPVAHYWQGHTWIALYEPASTVPMRAARAP
SPAQAAALAAGRALAGTRPCTICGTRTLIEWLDRHGCCDACLEDVAREKRDEAARGLHIT
ANEWLAADPLFIDTETTGLDHQAAIVEIAILDRAGAVLIDTLVKPAMPIPAAATEIHGIT
DADVAGAPAWNTIGPQVAELLAGRLLIAHNGAFDERLLYQTSRSHGVTLPALRVECTMEL
LNGWAGRWLSLADAALMLGAGTFAARHRACADAEQCRQIVLAAARAAPVDARP
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcgctacccgaaccgagccacagcgccgctcgagctgcagacgaaaaccgagctgaag
caggcgcggcgcaatctggccgatggccaggcaccggttgcgcactactggcagggccat
acttggatcgcgctttacgagcctgcgtcgacggtgccgatgcgcgcggctcgcgcgccg
agtcccgctcaagcggccgcgctcgcagccggccgggcactggcgggtacccggccatgc
acgatctgcggcacgcgcaccctaatcgaatggctggatcgacacggatgctgcgacgcc
tgccttgaggatgtcgcgcgcgagaagcgtgacgaagcggcccgcggcctccacatcacc
gcgaacgagtggctggcagctgatccgctgttcatcgacaccgaaacgaccggcctggat
caccaggcggcgatcgtcgagatcgcgattctcgatcgcgccggcgccgtgctgatcgac
acgctcgtgaagcctgccatgccgatacctgcggctgcgacggagatccacggaatcacc
gacgcggacgtcgccggcgcgcccgcctggaacacgatcggtccgcaggtggccgagctg
ctcgccggccgactgttgatcgcccacaacggtgcgttcgatgagcgtttgctataccaa
acatcgcgatcccacggcgtgacgttgcctgcgctgcgcgttgaatgcacgatggaattg
ctgaacggctgggccggtcgctggctcagtctggccgacgccgcgctgatgctcggcgcc
gggacattcgcggcccgtcatcgggcctgtgcagatgccgagcaatgccgccagatcgtg
ctcgccgcggcccgcgcagcacccgttgacgctcggccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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