KEGG   Borreliella chilensis: OY14_01130
Entry
OY14_01130        CDS       T03543                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bchi  Borreliella chilensis
Pathway
bchi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bchi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OY14_01130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bchi03021]
    OY14_01130
   03019 Messenger RNA biogenesis [BR:bchi03019]
    OY14_01130
Transcription machinery [BR:bchi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     OY14_01130
Messenger RNA biogenesis [BR:bchi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     OY14_01130
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab ATPase_2 NACHT Spore_III_AA AAA DUF5091 AAA_22 DUF1269 AAA_18 AAA_25 OB_RNB
Other DBs
NCBI-ProteinID: AJA90060
UniProt: A0A0A7UVJ5
Position
complement(233927..235474)
AA seq 515 aa
MDKKNVGFDLESEIRRLDISKEFKLEDNLKKKVIKVVAKKGSASNVAKSADLSDVKDSNN
VVFPEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKVVEGLGTN
HTIAVTMKKTELIFLLVKILSENNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEALVEKMKKSKNNEIFLKTMSNGN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggataaaaaaaatgttggatttgatttagaaagtgagataaggcggttagatatttct
aaagaatttaagcttgaagataatttaaagaaaaaagtgattaaagttgttgctaaaaag
ggttctgcatctaatgtggcaaaatctgcagatttaagtgatgtaaaagattcaaacaat
gtagtgttccctgaatttgattatgatattcctgcttcaggtttagaaaataatattaaa
accttagagcaaagtaatattattaagttttttaatggtaaagattacgtagagattgaa
aagctttatgacaagccgattacagaggttagaaaagttgttgaaggtcttggaactaac
catactattgctgtaacaatgaaaaaaaccgagttaatatttttattggtaaaaatatta
agtgagaataatattaatgttttgtttacgggtgtgcttgacgtacttagtgatggttat
gggtttttgagaactgcttcaaattcttatctttcagggggtaatgatgtttatgtttct
ccttctcagattagactttttaatttaagaacaggtgatattttgtatggtcaaattaga
tcgcctagagatggcgagagattttttgccatggttaaaattaaatccatcaatgatcaa
gatcctacatttgctcaaaatagaataccttttgataatttaacccctctttatcctaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaagacttattaatcttttt
tcacctataggtaagggacaaagagctttaatagtttctcccccaaaagcgggaaagacc
actttgcttcaaaaaatagctaatgcaataactactaattattcggatgttattttgatg
atattacttattgatgaaaggccagaagaagttacagatatgatccgcagtgttaaaggc
gaagtaattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagaaatg
gttattgaaaaggcaaaaagacttgttgagaataaaaaagatgttgttattttgcttgat
tctattacgaggcttgcaagggcatataatcagactatgccaacttctggtaaaatttta
tcaggtggagtagattctaatgctcttcataaaccaaaaaggttttttggatctgctaga
aatattgaggaagggggaagtttaactattatagctactgctttggttgatactggtagt
aaaatggatgaagtaatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagacttttccctgctattaatattaaaaaatcaggtact
agaaaagaagagctattgcttagtgaagaggagcgttctaagattttgcttattagaaga
atacttggaggtgttgatgattatgagggagttgaagctctagtagaaaaaatgaaaaaa
agcaaaaataatgaaatctttttaaagacaatgagcaatggcaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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