KEGG   Baumannia cicadellinicola Hc (Homalodisca coagulata): BCI_0581
Entry
BCI_0581          CDS       T00349                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bci  Baumannia cicadellinicola Hc (Homalodisca coagulata)
Pathway
bci02024  Quorum sensing
bci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCI_0581 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BCI_0581 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bci03019]
    BCI_0581 (hfq)
   03036 Chromosome and associated proteins [BR:bci03036]
    BCI_0581 (hfq)
Messenger RNA biogenesis [BR:bci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BCI_0581 (hfq)
Chromosome and associated proteins [BR:bci03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BCI_0581 (hfq)
SSDB
Motif
Pfam: Hfq LSM Gag_p24_C
Other DBs
NCBI-ProteinID: ABF14247
UniProt: Q1LSQ5
Position
complement(610494..610754)
AA seq 86 aa
MAQGQSLQDIFLNVLRRERIQVSIYLFNGIKLQGHIESFDQFVIVLKNTISQMVYKHAVS
TIVPSKFVSHYANNSSNYSNHSGDRN
NT seq 261 nt   +upstreamnt  +downstreamnt
atggctcaggggcaatctttgcaagatatattcttaaatgtattacgtcgagaacgtatt
caggtttctatttatttgtttaatggcattaaattacaaggccatattgagtctttcgat
cagtttgtgattgtacttaaaaatactattagccaaatggtttataaacacgctgtatcc
actattgtaccatcaaaatttgtatcacactatgctaataatagtagtaactatagcaat
catagtggtgatcgtaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system