KEGG   Niallia circulans: C2I06_07530
Entry
C2I06_07530       CDS       T06357                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bcir  Niallia circulans
Pathway
bcir03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bcir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    C2I06_07530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcir03400]
    C2I06_07530
Enzymes [BR:bcir01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C2I06_07530
DNA repair and recombination proteins [BR:bcir03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     C2I06_07530
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Other DBs
NCBI-ProteinID: AYV66737
UniProt: A0A3G4Z658
Position
complement(1582692..1583621)
AA seq 309 aa
MKPIKPFEPLLTEAIPKGDQWIAQVKWDGTRILSYYDGENTKLFNRKKNERTQQYPELLK
TSSFVQAKNCILDGEVIALQDGKPSFYEVMKRDRVRNLERLSGLQEEIPITYMVFDILFL
DGQWLVDKPLLERQKILHEKIAETKVVRLVENFADMQGLFTVCQQHQLEGIVCKDLGSSY
VLGGKDARWLKRKKEQDLIAIVGGVTIKHKTVHSLHLGLFDESGQLVYIGSAGSSKLTAN
DWAAVSKAIEPIIIKESSFVNLKEAKDGVWLRPALTVKISFLEWTEGKTLRHPVIESFVT
IPIEECTLE
NT seq 930 nt   +upstreamnt  +downstreamnt
atgaaaccaataaagccgtttgaaccactactaacagaagcaattccaaaaggggatcaa
tggatagctcaagttaagtgggatggaacaagaattctctcctactatgatggagagaac
acaaaattatttaatcgaaagaaaaacgaaagaacgcagcaatatcctgaattactaaag
actagttccttcgtacaggcaaaaaattgtattctcgacggggaagttattgctttgcag
gatgggaaaccatccttttatgaagtaatgaaacgggacagagtgagaaatcttgagcga
ttaagtggtctgcaagaagagattcccattacctatatggtttttgatatcctgttcctc
gatggacagtggttagtagataagccgttactggaaagacaaaaaatattgcatgaaaaa
atagctgagacgaaagttgttcgacttgttgaaaattttgctgatatgcaaggtttattc
actgtttgtcaacaacatcagttggaaggaatcgtctgcaaggatcttggcagttcctat
gttctgggcggaaaagatgcaagatggcttaagagaaaaaaagagcaggatttaattgct
atagtgggaggagtaacaattaaacataaaacggttcattctctccacctcgggttattt
gatgagtcaggacagttggtttatattggaagtgccggttcgagtaaattgaccgcaaac
gactgggctgctgtctccaaggcgattgagccaatcattataaaagaaagttcttttgtt
aatcttaaggaagcgaaagatggagtctggctgcgaccagcactcactgtcaaaatctcc
tttttagaatggacagaaggcaaaacattaaggcatccagtcatcgagtcatttgtcact
attcccattgaagaatgcacattagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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