KEGG   Burkholderia cenocepacia J2315: BCAL0933
Entry
BCAL0933          CDS       T00771                                 
Symbol
rhlE1
Name
(GenBank) putative ATP-dependent RNA helicase 1
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bcj  Burkholderia cenocepacia J2315
Pathway
bcj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCAL0933 (rhlE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcj03019]
    BCAL0933 (rhlE1)
Enzymes [BR:bcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BCAL0933 (rhlE1)
Messenger RNA biogenesis [BR:bcj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BCAL0933 (rhlE1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA Ric8 DegT_DnrJ_EryC1 Sacchrp_dh_NADP CMS1 CARD_2
Other DBs
NCBI-ProteinID: CAR51239
UniProt: B4EBW3
Position
1:complement(1015888..1017321)
AA seq 477 aa
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
QRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQQPRGGGGGGNRQPRAGGSGQPAAKR
DGHAQPKAAKPRTQGGAGAGGNGGGRPAGGGNGARPANGNAAHANRNRSSRSGQRGH
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtctttcgaatctctcggcctggccgaaccgctggtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggcgatcccggccgtcctcggcggcggcgac
ctgctcgccggcgcacagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacacgttctacgccgagcaccgtggcgcgaagcgcgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtccgtgcgtacagc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccaggccgcctgctcgatcac
atgcagcagaagaccatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cagcgtcagaacctgctgttctcggccaccttctccgatgaaatcaaggcgctcgccgac
agcctgctcgactcgcccgccctgatcgaagtcgcgcgccgcaacacgaccgccgagagc
gtcgcgcagaagatccacccggtcgatcgcgaccgcaagcgcgagctgctcacgcacctg
atccgcgaacacaactggttccaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggcttgccgagcagctgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctggccgagttcaagaacagcacgctgcaggtgctc
gtcgcgaccgatatcgccgcgcgcgggatcgacatcgaccagttgccgcacgtcgtcaac
ttcgacctgccgaacgtgcccgaggattacgtgcaccggatcggccgcacgggccgcgcg
ggggcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgagaagcagttgctgcgcgac
atcgagcggctgatcaagcgcgagatcccgcaggaagtgatcgcgggcttcgaacccgat
ccgaacgcgaagccggagccgatccagcagcgccgcgggcagcagcaaccgcgtggcggt
ggcggcggcggcaatcgccagccgcgcgccggcggctcaggccagccggccgcgaaacgc
gacggccacgcgcaaccgaaggccgcgaagccgcgcacgcaaggcggtgccggcgccggt
ggtaacggcggcggacgtccggcgggcggcggcaacggcgcccgcccggcgaacggcaac
gccgcgcacgcgaaccgcaaccgttcgtcgcgcagcggccagcgcggtcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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