KEGG   Burkholderia orbicola: Bcenmc03_1007
Entry
Bcenmc03_1007     CDS       T00669                                 
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
bcm  Burkholderia orbicola
Brite
KEGG Orthology (KO) [BR:bcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcm03032]
    Bcenmc03_1007
   03036 Chromosome and associated proteins [BR:bcm03036]
    Bcenmc03_1007
   03400 DNA repair and recombination proteins [BR:bcm03400]
    Bcenmc03_1007
DNA replication proteins [BR:bcm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Bcenmc03_1007
Chromosome and associated proteins [BR:bcm03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Bcenmc03_1007
DNA repair and recombination proteins [BR:bcm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Bcenmc03_1007
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ACA90184
UniProt: B1JXS2
Position
1:1115818..1116141
AA seq 107 aa
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDDR
NT seq 324 nt   +upstreamnt  +downstreamnt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctggcgaaaggg
catcgcattgaaattcggggtttcggcagctttggcctcaatcgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aaacctggcaaggaattgcgtgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgaccgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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