KEGG   Burkholderia orbicola: Bcenmc03_1189
Entry
Bcenmc03_1189     CDS       T00669                                 
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bcm  Burkholderia orbicola
Pathway
bcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Bcenmc03_1189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcm03400]
    Bcenmc03_1189
Enzymes [BR:bcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Bcenmc03_1189
DNA repair and recombination proteins [BR:bcm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Bcenmc03_1189
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 UvrD-helicase SH3_13 Helicase_RecD SLFN-g3_helicase DEAD AAA_22 MukB AAA_25 RecD_N ATPase CbiA
Other DBs
NCBI-ProteinID: ACA90364
UniProt: B1JYW4
Position
1:1307914..1310235
AA seq 773 aa
MTASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPSASARWAARAAFAT
SRATASGHVCVALGALAQRYEAPLDEVRAALAASGVVAFGTLARGDERPLIVDRLDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLSPDRLRDSLARYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIAQALGIDEATFVAALPVPDEAA
PAAVPAAHPVASARAPASPSASAPVSRKSVSRPKVDARQASLFDDEPQDDEVSPADIDID
IAPPPPTESAPTDAGAPEGDAPAWIEPDDLAWLDAVELPPFDAGDAALASMTAPVSLLAG
EAPAAAASTGTPAPAPLADCVVWLERNYRFGLDSPIGRLSVAIRRGDVQAALEALPADDS
AAASFHDDAGDTLASSTVERLARRFGAYLDALRDALAAPAPDPLPLFDALNRFRILCATR
SGSRGAEHVNALVAAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDA
HGVLRVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRE
LVYTAVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRMDVSR
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgaccgcatccgacgacatgctcgaattcaccggcggtctcgtcgcgcggctgcccgag
ccggccgatttcggcatcgcgctcgcggaaggcttcgcacgccgcatcggcgacctcgcg
cgacgtgccggtgcgccgtccgcgtcggcacgctgggcggcgcgcgccgcgttcgcgacg
agccgtgcgaccgcgagcggccatgtgtgcgtcgcgcttggcgcgcttgcgcagcgctac
gaagcgccgctcgacgaggtccgcgccgcgcttgccgcgagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgaccggctcgatcacctgtacctg
tcgcgctatttcgattacgaacggcggcttgccgatgcgctcgtcgcgcaggccggcgtc
gccgcgccggacgaaggcctgtcgcccgaccggctgcgcgacagtctcgcccgttacttc
gggccggccaccggtgaagtcgactggcagcgcgtcgcggcgatcgtcgcgctgaccggc
cgcgtgacgatcgtcagcggcgggccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgcgcacccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgcaggcgatctgccgcccgag
ctcgcggcgcgcctgcccgacacgtcgtacacgctgcatcggctgctgggcggcggcggg
gcggccggcttccggcatcatcgcgacaatccgttgccgtacgatctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgttgctgggggacaaggatcaactggcggcggtcgaggccggcgccgta
ttcgcggaactgagcgcgcggccggcgttcaccgccgcggcgcgcacgcgcatcgcgcag
gcgctgggcatcgacgaggcgacgttcgtcgcggcgttgccggtgccggacgaggcggcg
ccggccgcggttccggccgcgcatccggttgcgtccgcacgggctccggcgtcgccatcg
gcatctgcgcctgtttcgcgcaaatcggtgtctcgaccgaaagtcgatgcgcgacaggca
tcgctcttcgacgatgaaccgcaggatgacgaagtgtcgccggccgacattgacatcgac
atcgcgccgccaccgcccaccgagtcggcaccgaccgatgccggcgcaccagagggtgat
gcgcccgcctggatcgagcccgacgacctcgcatggctcgacgcagtcgagctgccgccg
ttcgacgcaggcgatgcggcgcttgcatcgatgacggcgcctgtatcgttattggccggt
gaagcgccggccgcagccgcgtccaccggcacgcccgctccggcgccgctcgcggactgc
gtggtgtggctcgaacgcaattaccgcttcggtctcgattcgccgatcgggcggctgtcg
gtcgcgatccgccgcggcgacgtacaggcggcgctcgaggcgctgcccgccgacgactcg
gccgccgcgtcgtttcacgacgatgcgggcgacacgctggcgtcgtcgacggtcgagcgg
ctcgcccggcgtttcggcgcctacctcgacgcattgcgcgatgcgctggccgcgccggcg
cccgatccgctgccgctgttcgacgcgctcaaccggttccggatcctgtgcgcgacccgc
agcggctcgcgcggcgcggaacacgtcaatgcgctggtggccgcgcacgtacggcatgcg
gctcgcgtgccgctcgcggtcggcgcgcactggttcaccgggcggccgatcatggttaca
cgcaacgactacgcgctggggctgttcaacggtgatatcggcattgcgctgcccgacgcg
catggcgtgctccgcgtgtggttccggcgcgcggacggcaccgcgcgggcggtgtcgccg
gctgcgctgccgccgcacgaaacggcgttcgcgctgacggtgcacaaatcgcagggctcg
gaattcgacgaagcggcgctcgtgctgcccgcgtcgtttggccgggtgctgacgcgcgag
ctggtctatacggccgtcacgcgcgcccgcacgcgcgtgcaggtgatcgggccgaggcgc
gtgctggcgcaggcggtcgcgacacgcacgcagcgcgattcggggctcgcggcccgcgtc
gacgaggcgcttgcccggcgccgcatggatgtttcgcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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