KEGG   Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_136
Entry
BF29_136          CDS       T03712                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bcoa  Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa02024  Quorum sensing
bcoa03060  Protein export
bcoa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bcoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BF29_136 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BF29_136 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BF29_136 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bcoa02044]
    BF29_136 (ffh)
Enzymes [BR:bcoa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BF29_136 (ffh)
Secretion system [BR:bcoa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BF29_136 (ffh)
  Eukaryotic Sec-SRP protein
   BF29_136 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin AAA_17 AAA_30 6PF2K CbiA AAA_33 AAA_16 MMR_HSR1 AAA_19 APS_kinase AAA_24 ResIII AAA_28 AAA_18 WDCP
Other DBs
NCBI-ProteinID: AJH79034
Position
138042..139385
AA seq 447 aa
MAFEGLAERLQGTMQKIRGKGKVTESDVKEMMREVRLALLEADVNFKVVKDFVKKVSERA
VGQEVLKSLTPGQQVIKIVQEELTNLMGGSQSKIAVAKRPPTVIMMVGLQGAGKTTTSGK
LANLLRKKYNRTPLLVAADIYRPAAIKQLETLGKQLGMPVFSLGDKISPVEIARQAIEKA
KEEHHDTVIIDTAGRLHIDSELMNELKEIKELAHPDEIFLVVDAMTGQDAVNVAQSFNDQ
LGITGVILTKLDGDTRGGAALSIRAVTEKPIKFAGMGEKMDALEPFHPERMASRILGMGD
ILSLIEKAQETVDEEKARALEKKMRDQSFTFEDFLEQLGQVRKMGPLGDILKMIPGANRM
KGMDNLQIDEKQIAHVEAIIQSMTKQEKIRPDIINASRKKRIAKGSGRPVQEVNRLLKQF
EEMKKMMKQLQGMNQKGRKKGFKFPFM
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcatttgaaggactcgcagaacgcctgcagggcacgatgcagaaaatccgcggaaaa
ggcaaggtcacggaaagcgacgtcaaagaaatgatgcgggaagtccgccttgcccttctg
gaagctgacgtcaacttcaaagtggtaaaagattttgtaaaaaaagtgagcgaacgcgcg
gtcggccaggaggtgctgaaaagcctgacacccgggcagcaggtcattaaaattgtccag
gaagagctgaccaatcttatgggcggatcccagagcaagattgccgttgcaaagcgcccg
ccgaccgtcatcatgatggtcggcctgcagggtgccgggaaaacgacgacatcggggaaa
ctggccaacctgctgcgaaaaaaatacaaccggaccccgctgctcgttgcggccgatatt
taccgccccgctgcaatcaagcagctggaaacgctcggaaaacaactcggcatgccggta
ttttcgcttggcgacaaaatcagcccggtggaaattgccaggcaagcgattgaaaaagca
aaagaagaacatcacgataccgtcatcatcgatacggccggccgcctccatattgacagc
gagctgatgaatgaattgaaggaaatcaaggaacttgcgcatccggatgaaatttttctt
gtcgtcgatgcgatgacaggccaggatgccgtaaatgtcgcgcaaagttttaatgaccag
ctcggcatcaccggcgtcatcctgacgaagcttgacggcgacacgcgcggcggggcggct
ttatccatccgggccgtaaccgaaaagccgattaaatttgccgggatgggcgagaaaatg
gatgcactcgaaccgtttcacccggaaaggatggcttcccgcattctcggcatgggcgat
atcctgtcgctgattgagaaagcgcaggaaaccgttgatgaagaaaaagcgcgcgcgctc
gaaaagaaaatgcgggatcagtcgtttacgtttgaagatttccttgagcagctcggccag
gtccggaaaatggggccgctcggtgacattttgaaaatgatcccgggggccaaccggatg
aaagggatggataatctgcaaattgatgagaagcaaattgcgcatgtcgaagcgattatc
cagtcgatgacaaagcaggaaaaaatccgcccggacattatcaatgcaagccggaaaaaa
cggattgcgaaaggttccggccgcccggtgcaggaagtcaaccggcttttgaaacaattt
gaagaaatgaagaaaatgatgaaacaactgcaaggcatgaatcaaaaaggccgaaaaaaa
ggctttaaattcccttttatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (30)   

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