KEGG   Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_2026
Entry
BF29_2026         CDS       T03712                                 
Symbol
ssbB
Name
(GenBank) single-stranded DNA-binding protein ssbB
  KO
K03111  single-strand DNA-binding protein
Organism
bcoa  Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03030  DNA replication
bcoa03430  Mismatch repair
bcoa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BF29_2026 (ssbB)
   03430 Mismatch repair
    BF29_2026 (ssbB)
   03440 Homologous recombination
    BF29_2026 (ssbB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcoa03032]
    BF29_2026 (ssbB)
   03400 DNA repair and recombination proteins [BR:bcoa03400]
    BF29_2026 (ssbB)
   03029 Mitochondrial biogenesis [BR:bcoa03029]
    BF29_2026 (ssbB)
DNA replication proteins [BR:bcoa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BF29_2026 (ssbB)
DNA repair and recombination proteins [BR:bcoa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     BF29_2026 (ssbB)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    BF29_2026 (ssbB)
Mitochondrial biogenesis [BR:bcoa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    BF29_2026 (ssbB)
SSDB
Motif
Pfam: SSB tRNA_anti-codon
Other DBs
NCBI-ProteinID: AJH79670
Position
1968002..1968361
AA seq 119 aa
MINQVTLVGRLTKDPDLHYTADGKPVLNITLALNRHYRNQFGETLTDFVQCTLWNKIAEN
TSKYCAKGSMLGITGRIQTRHYDNKDGKRVYVTEVIADTVQFLSKRPENKPLQETGQGG
NT seq 360 nt   +upstreamnt  +downstreamnt
ttgattaaccaggtcacattagtcggaaggctcacaaaagatccggatcttcactacaca
gcagacggaaaaccggtgctaaatattacgcttgccttaaaccgccattaccggaatcaa
tttggcgaaacgttaaccgattttgtccaatgtaccctttggaataaaatcgcggagaat
acaagcaaatattgcgcaaaaggttccatgctcggcattaccggccggattcagacccgc
cactatgataataaggacggaaaaagggtctacgtcaccgaagtcattgccgacacagtc
caatttttaagcaaacggccggaaaacaaaccgctgcaggaaaccggccagggagggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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