KEGG T03712: BF29

Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_478

Entry

BF29_478          CDS       T03712

Symbol

xth

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

bcoa Heyndrickxia coagulans DSM 1 = ATCC 7050

Pathway

bcoa03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:bcoa00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BF29_478 (xth)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcoa03400]
    BF29_478 (xth)
Enzymes [BR:bcoa01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BF29_478 (xth)
DNA repair and recombination proteins [BR:bcoa03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BF29_478 (xth)

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2

Other DBs

NCBI-ProteinID:

AJH77794

Position

complement(477273..478028)

AA seq 251 aa
MKFVSWNVNGLRACVKKGFLAFFAETGADIFCVQETKLQEGQIALDLDGYYQYWNYAERK
GYSGTAVFTKKEPLSVRYGVGENRTEPEGRILTLEYEDFYLVNVYTPNSQRDLARLGYRL
EWENRMRAYLTDLDKKKPVIVCGDMNVAHQEIDLKNAKSNIGNSGFTAEERDKMTGLLNS
GFIDSFRYFYPEREGAYTWWSYMNKVRERNIGWRIDYFLVSKRLAGRLKGAGMYPEIMGS
DHCPVFLETNF

NT seq 756 nt +upstreamnt +downstreamnt
atgaaatttgtttcttggaatgtgaacgggctccgcgcctgtgtaaaaaaagggtttctt
gcattttttgcagaaaccggcgccgacattttttgcgtgcaggagacgaaactgcaggaa
ggccagatcgcccttgatttggacggctattatcaatattggaactatgccgagcggaaa
gggtattcgggcacggccgtttttacaaaaaaagaaccgctttccgtgcgctacggcgtc
ggggaaaatcggacagaaccggaaggccggattttgacactcgaatatgaagatttttat
ttggtcaatgtttatacgccgaattcccagcgcgatcttgcccgcctcggttaccgcctc
gaatgggaaaaccggatgcgggcctatttaacggatcttgataaaaagaagccggtcatt
gtatgcggcgatatgaacgttgcccatcaggaaattgatttaaaaaatgcaaaaagcaac
atcggcaattcagggtttacagcggaagagcgcgataaaatgaccgggctgctgaacagc
ggatttattgattcgttccggtatttttatcctgagcgggaaggcgcatatacatggtgg
tcttatatgaataaagtaagggaaaggaatatcggctggcggattgactattttctcgta
tccaaaagacttgccggccgtttaaaaggtgccggcatgtatccggaaataatgggcagt
gaccactgtccggtatttttagaaaccaatttttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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