KEGG   Baudoinia panamericana: BAUCODRAFT_123413
Entry
BAUCODRAFT_123413 CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
bcom  Baudoinia panamericana
Pathway
bcom03020  RNA polymerase
bcom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BAUCODRAFT_123413
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAUCODRAFT_123413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcom03021]
    BAUCODRAFT_123413
   03400 DNA repair and recombination proteins [BR:bcom03400]
    BAUCODRAFT_123413
Transcription machinery [BR:bcom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     BAUCODRAFT_123413
DNA repair and recombination proteins [BR:bcom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BAUCODRAFT_123413
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L CTD
Other DBs
NCBI-GeneID: 19107775
NCBI-ProteinID: XP_007677630
JGI: Bauco1_123413
UniProt: M2MTP9
Position
Unknown
AA seq 389 aa
MDLYSTNGYLDADDSGPRVTIRSANDTTISFVLQHTSLALANSLRRTILAEIPTIAIDLV
EIESNTSVLPDEFLAHRMGLIPLSTRDVEDMFYTRDCACDEFCDNCSVVLQLNVANRNLD
HNLKVFARDLTVTRVDGTPITDPRSTAHLTNGAAGLHSHAEELPPRGFPILMDPEQKGPL
LCSLRKGQDLKLRCIAKKGIAKEHAKWAPTAAIGFEYDPHNKLRHTTLWHEEDAKKEWPE
SKNREWEEPPQEGQNFDFVAEPEQFFLNLEGTGVMPPDGVVHAGIRTLQQKLATVIQQLA
TTTDTGHEINGLGGRGDADMGGMSPPDDGAGTAYGGRMSAYGQTAYGGGTTPAYGGQGTA
YGGQTPAYGQGSVYGGVGGATPYGSRPGY
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggacctctactccaccaacggctacctcgatgccgacgactccggtccgcgcgtcacc
attcgctccgccaacgacaccaccatctccttcgtcctgcagcacacctccctcgccctc
gccaactccctgcgccgcaccatcctcgccgagatccccaccatcgccatcgacctcgtc
gaaatcgaatccaacacctccgtccttcccgacgagttcctcgcccaccgtatgggcctc
atcccgttgagcacacgggatgtggaggacatgttctacacgcgcgactgcgcttgcgac
gagttctgcgataactgttccgttgtgctgcaactgaacgtggcgaaccggaatttggat
cataatctcaaggtctttgcacgcgatcttacggtcacgagagtcgacggcacacccatc
accgacccacgcagcaccgcccatctcaccaacggcgcagcgggactacattcccacgcc
gaagaactccctccccgcggcttccccatcctaatggaccccgagcagaaaggtcccctc
ctctgctccctccgcaaaggccaagacctcaaactccgttgtatcgcgaagaaaggtatt
gcaaaagaacacgccaaatgggcgcccacggctgcgataggatttgagtacgacccgcat
aacaaactccgtcataccacactctggcatgaagaggatgcgaagaaagaatggccggag
agtaagaacagggagtgggaggagccaccgcaggaggggcagaacttcgacttcgtggcg
gagccggagcagttctttttgaatctcgaggggacgggcgtgatgccgccagatggtgtg
gtgcatgcgggaatcaggacgttgcagcagaaactcgcgactgtcatacagcagttggct
acgactacggacacgggacatgagataaatggtctaggtggcagaggggatgcggatatg
ggcggtatgagcccgcctgacgacggtgctggcactgcgtatggtgggaggatgtccgca
tatgggcagactgcgtatggtggtggaactacgccggcatatggagggcagggaacggca
tatggaggccagacgccggcgtatgggcagggcagtgtttatggtggggttggcggtgcg
acgccttatgggagccggccggggtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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