KEGG   Baudoinia panamericana: BAUCODRAFT_39329
Entry
BAUCODRAFT_39329  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
bcom  Baudoinia panamericana
Pathway
bcom03420  Nucleotide excision repair
bcom04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    BAUCODRAFT_39329
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAUCODRAFT_39329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bcom04121]
    BAUCODRAFT_39329
   03400 DNA repair and recombination proteins [BR:bcom03400]
    BAUCODRAFT_39329
Ubiquitin system [BR:bcom04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     BAUCODRAFT_39329
DNA repair and recombination proteins [BR:bcom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      BAUCODRAFT_39329
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160
Other DBs
NCBI-GeneID: 19113769
NCBI-ProteinID: XP_007681378
JGI: Bauco1_39329
UniProt: M2LBF9
Position
Unknown
AA seq 352 aa
MLILVRTSTTESLGVTQISFYPFDSGAFLTSGYDMTVKLFSSETLKPSATFDLGSIVYSH
AMSTVSRHLLVACAGQHPAVRLVDLRSGSSAHSLAGHAGSVLSVAWHPKNENVLASGASD
GTCRLWDIRRSASSLGVLDMTDSAGIVGYNGIGTGARRRERGKAHNGAVNGITWSYDARY
LVTVGHDERMRVWNMLTGANTLASFGPSLRNTTTTLLTPAIAPAHFSPPGTDIVYYPNPG
EILAFGMHDGTLLRRLRIPTTQMRRFEGGSIHNLNTRTSALAWRPHNVELYSAHTDGSIR
SWRPRTDEEIALDKEDEDSTWTDDHDAAERKRKRDNLDQIVRDVTGRKVAYM
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgctgatcctagtaaggacctcgacgacagaaagcttgggagttactcagatctctttc
tatccttttgattcaggtgccttcctgacgagcgggtacgatatgaccgtcaagcttttc
tcatccgaaacattgaaaccatctgccactttcgaccttggatccatcgtgtactcgcac
gcaatgtctacagtctctagacacctactcgttgcatgcgccggtcagcatcctgccgta
cgcttggttgacctacgctccggatcaagtgcgcactctctggctggtcacgccgggtca
gtcttgtctgtggcgtggcatccgaagaatgagaacgtgcttgcaagtggtgcaagtgat
ggcacatgccggctctgggacattcgaagaagtgcaagcagtctgggcgtactcgacatg
accgatagtgccggtatcgtaggttacaacggcatcggaaccggcgctcgtcgacgtgag
cgaggaaaagcacacaatggtgccgtaaacggcatcacgtggtcatatgatgccagatac
ctcgtcacggttgggcatgatgagcgaatgcgcgtgtggaacatgcttacgggcgcgaac
acgctagctagtttcgggccatctttgaggaacaccacgacgacactcctaacacctgct
atcgctccggcacatttttctcctccagggaccgatattgtctattacccgaaccctggt
gagattctcgcatttggcatgcatgacgggacactgttgagacgactgcgaataccaacc
actcaaatgcgacgcttcgaaggtggcagcattcataacttaaacacaaggaccagcgct
ctggcttggcgtccacacaatgtggagctttactcggctcatacagatggatcaattcgg
agctggcgacctcgtaccgacgaagagatcgcacttgacaaggaagatgaagattcgact
tggaccgacgatcatgatgcggcagagagaaagcggaagcgggacaacttggaccaaatc
gtccgcgacgtcacagggcggaaggtagcctatatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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